Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05530 ATGAACTATGCATGTTATCATATGGGGTCTGGTAGTAGAACTGATAGAAGAACTTTGGAGTTTGGTAAGACACATGTAGTGAGGCCTAAAGGAAAACATCAAGCTACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGCTCATATCAGCTTCTGGAATCACTTCCACTTCCAAATGTAAAATGGATTTGTCCAACTGCTCCAACTCGTTCTGTAGCTATACTTGGAACTTTTTCTTGCACTGCATGGTTTGATATGGGAGAACTTTCAGAAGATGGTCCAGTTGATTGGGAGGGTTTAGATGCCTCAGCTGCACATATTGCTAATCTGTTGTCAGCTGAGCCACCTGATGTGAAAATTGGGATTGGAGGGTTAAGTATGGGTGCTGCAACAGCTCTCTATTCTGCAACATGTTTTGCCATGGGAAAATATGGAAATGGAATTCCTTATCCTATCAACATAAGAGCAGTTGTTGGACTAAGTGGATGGCTTCCAGGATTAAGGAGCTTAAGGAGCAAGATAGAGGTGTCACATGAAGCAAAAAGGAGAGCTGCTTCATTGCCAATTTTTATGTGCCATGGAATTAGTGATGATGTAGTTCTCTACAAATTTGGAGAGAAATCAGCTCAATCCTTGAGTTCAGCAGGGTTTCAATATATAACCTTCAAATCCTATGATGGGGTTGGTCATTATACAGTTCCTAGAGAGATGGCTGATGTTACCAATTGGCTTGGCTCAAGGTTAGGGCTTGAGGGACCCTTATAA 771 0.4163 MNYACYHMGSGSRTDRRTLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNVKWICPTAPTRSVAILGTFSCTAWFDMGELSEDGPVDWEGLDASAAHIANLLSAEPPDVKIGIGGLSMGAATALYSATCFAMGKYGNGIPYPINIRAVVGLSGWLPGLRSLRSKIEVSHEAKRRAASLPIFMCHGISDDVVLYKFGEKSAQSLSSAGFQYITFKSYDGVGHYTVPREMADVTNWLGSRLGLEGPL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05530 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Vifa2g05530 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Vifa2g05530 256 Pfam Phospholipase/Carboxylesterase 24 246 IPR003140 GO:0016787
Vifa2g05530 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05530 Vifa-Chr2 1643487319 1643489625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05530 3 254 Acyl Lipid Metabolism Gene Families AT3G15650 72.222 5.26e-123 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05530 K06130 - gmx:100782153 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05530 2 1643487319 1643489625 Vifa5g00136 5 16244429 16246677 ECH
Vifa2g05530 2 1643487319 1643489625 Vifa2g05530 2 1643487319 1643489625 ECH
Vifa5g00136 5 16244429 16246677 Vifa2g05530 2 1643487319 1643489625 PCT