Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05490 ATGCGGTACTGGAGTGGGTTGGAGGGGAAGGGAGAGATGAAAGCGGAAGTGGAGAGAGAGAGAATACCCCTGGATTTTTTACAAGGTGACAAATTTCGAGAAGCAGCAGAAAATTATATTAGGCCTCTCTTAACTAAGGGAGTTCCATCTCTGTTTTCTGATCTTTCTTCTTTGTACAATCATCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCATTCAATTAGGACATCAAGCCAATATCCTAGGAGTACGGAGAAAGAATCCCCTTCAACTCTTTTGTGGACTTTGTTTTTCTTGGCTCAGCATTATGACAGGCTCGGCCAATATGCGAATTCTCTTTCTAAAATCGACGAGGCTATAGAACACACACCTACTGTCATTGATCTATATTCTGTCAAGAGTCGGATATTGAAGCATGCTGGTGATTTGAATGCTGCTGCTGCATTTGCAGATGAAGCAAGACGTATGGATCTTGCTGACCGTTATGTTAATAGTGAATGTGTTAAGCGGATGCTGCAGGCTGATCAGGTTGCTTTGGCAGAAAAAGTTGCTGTGTTGTTCACAAAAGAAGGAGATCAGCATATCAACCTTCATGATATGCAATGCATGTGGTATGAGCTTGCCTCAGGTGAAAGCTTTTTCCGCCAGGGCAATCTTGGACGGGCTCTCAAAAATTTTTTAGCAGTGGAGAAGCATTATGCCGATATTATTGAGGACCAATTTGACTTTCATTCATACTGCTTAAGGAAAATGACTTTGCGTACTTATGTTGAAATGCTTAGATTTCAAGACCAATTGCACTCACATGCATATTTTCATAAAGCAGCAGCAGGAGCTATCAAATCTTATATTAAGTTGCATGATTTTCCCCCAAAGTCTACAACAGAGGAAGATGAGCATATGTTAAACTTGCTTCCTTCTCAAAAAAAGAAATTGCGACAAAAGCAAAGGAAGGCAGAAGCAAAAGCTAAGAAAGAGGCAGAAGAAAAGAATGAAGAATTAAATTCTAGCACGGCATCAAAGTCTGGGAAGCGGAATGTAAAACCTGTTGATCCTGATCCTCATGGGGAAAAGTTAATGCAGGTTGAAGATCCATTGTCCGAAGCTGTTAAATACTTAAAGTTGCTGCAGAAGAATTCACCTGATTCATTGGAAACACATTCGCTCTCTTTTGAATTATATACAAGAAAACGGAAGATTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTACTGAGATTGGATGCTGATCACCCTGATTCGCATCGTTGCTTGATTAAATTTTTCCATCAATTTGGATCCATGGGTACTCCTGTGACTGAAAGCGAGAAACTGATATGGAGTGTCTTAGAAGCTGAGTGCCCAACTATTAGTCAACTGCATGAAAAATCTCTTCTTGACGCAAACAATGCTTTCCTTGACAATCATAAAGATTCTTTGATGCATATAGCAGCTTTTACGGAAATCTTGTACATTTTGGATTCTAACAGAAAGTCTGAGGCTGTCAAGTTGATTGAAGAGTCAGCAAATAAAATTGTGCCTAGAAATGAAGCAATCGGACCAATTGGAAAGTGGAAACTTAAAGATTCTATAGCAGTTCACAAGCTTCTTGGAACAGTACTTGTTGACCAAGATGCGGCATTGAGGTGGAAAGTGCGGTGTGCAGAGAATTTCCCTTATTCAACTTACTTTGAGGGAAAACACAGCTCTGCCTCTCCCAACTCGGCCTTTAATCAGTTACGCAAGAACTCTGAAAATGTTAGTCCTAACCGTGCAGTTGATAATCAAAATGTGAGCTCTGCCACATCGAATGGCAAATCATTTGAAAATCTCACTATCTGA 1854 0.4029 MRYWSGLEGKGEMKAEVERERIPLDFLQGDKFREAAENYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTSSQYPRSTEKESPSTLLWTLFFLAQHYDRLGQYANSLSKIDEAIEHTPTVIDLYSVKSRILKHAGDLNAAAAFADEARRMDLADRYVNSECVKRMLQADQVALAEKVAVLFTKEGDQHINLHDMQCMWYELASGESFFRQGNLGRALKNFLAVEKHYADIIEDQFDFHSYCLRKMTLRTYVEMLRFQDQLHSHAYFHKAAAGAIKSYIKLHDFPPKSTTEEDEHMLNLLPSQKKKLRQKQRKAEAKAKKEAEEKNEELNSSTASKSGKRNVKPVDPDPHGEKLMQVEDPLSEAVKYLKLLQKNSPDSLETHSLSFELYTRKRKILLAFQAVKQLLRLDADHPDSHRCLIKFFHQFGSMGTPVTESEKLIWSVLEAECPTISQLHEKSLLDANNAFLDNHKDSLMHIAAFTEILYILDSNRKSEAVKLIEESANKIVPRNEAIGPIGKWKLKDSIAVHKLLGTVLVDQDAALRWKVRCAENFPYSTYFEGKHSSASPNSAFNQLRKNSENVSPNRAVDNQNVSSATSNGKSFENLTI 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05490 617 Coils Coil 314 345 - -
Vifa2g05490 617 Pfam N-terminal acetyltransferase A, auxiliary subunit 20 414 IPR021183 -
Vifa2g05490 617 Gene3D - 223 441 - -
Vifa2g05490 617 MobiDBLite consensus disorder prediction 570 617 - -
Vifa2g05490 617 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 20 544 - -
Vifa2g05490 617 MobiDBLite consensus disorder prediction 309 363 - -
Vifa2g05490 617 SUPERFAMILY TPR-like 99 425 IPR011990 GO:0005515
Vifa2g05490 617 PIRSF NAT_A 14 536 IPR021183 -
Vifa2g05490 617 Gene3D - 11 221 - -
Vifa2g05490 617 MobiDBLite consensus disorder prediction 324 340 - -
Vifa2g05490 617 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 223 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05490 Vifa-Chr2 1634634449 1634641055 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05490 K20792 - gmx:100820094 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05490 2 1634634449 1634641055 Vifa2g05490 2 1634634449 1634641055 ECH
Vifa5g00155 5 19771312 19782727 Vifa2g05490 2 1634634449 1634641055 PCT