Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05481 ATGTACTTGTTGGGATATCTTGCCAGCCAAAGTAGGGTTTATTTGATTGACAAAGAATTCAATGTTGTGGGCTACACACTCCTTTTAAGCTTGATTGAGTACAAGACTCTTGTGATGCGTGGTGATTTGGAAAGGGCTAATGAAATTCTACCATCAATTCCAAATGAGCATCATAATAGTGTGGCTCATTTCCTGGAATCACGAGGCATGATAGAGGATGCTATTGAAGTTGCTACTGACCCTGAGTACAGATTTGATCTTGCCATACAGCTTGGAAGATTAGAGGTTGCAAAGGCTATTGCTATAGAAGTGCGGAGTGAGTCTAAATGGAAACAGTTGGGAGAATTAGCTATGTCTAGTGGAAAGTTAGAAATGGCTGAGGAGTGTTTAGAACATGCAATGGATTTGAGTGGATTGTTGCTTCTATATTCTTCATTAGGAGATGCTGAAGGAATATCAAAACTTGCAATTCTTGCTAAAGAGCAAGGAAAGAACAACGTTGCTTTCCTTTGCTTATTTATGTTGGGTAAACTTGAAGATTGCCTTCAGTTGTTGGTAGAAAGCAATCGGATTCCAGAGGCTGCTTTGATGGCTCGATCGTATCTTCCAAGCAAGGTCTCAGAGATAGTGGCAATATGGAGAAAAGATCTCGGCAAGGTTAATCCAAAAGCTGCTGAATCTTTGGCTGATCCTGAGGAGTATCCTAATTTGTTTGAAGATTGGCAAGTTGCACTTGCTGTTGAATCTAAAGCTTCAGAAACAAGGGGCGTTTACCTTCCTGCAGAGGAGTATGTTAACCATGCTGATAAATCACATGTCACTCTTGTTGAAGCTTTCAGAAAGATGCAGATAGAAGAAGGGGATCAGCCTCTTGAGAATGGGGATTCTAATCATGAGTTGACCGAACAAAATGGAGAAGAGGATTATACAGCGGGGCACAGAGAACAAAATGGAGAGGAAGGAAGCCAAGAGGATGAAGTTGTAGTGGATGCTGATTCTACTGATGGTGCAGTTCTCGTTAATGGCAACGAGGCTGATGAAGAGTTGAGTACGAATAAAGAAGGAGCCCCGTCAGCGTAA 1080 0.4176 MYLLGYLASQSRVYLIDKEFNVVGYTLLLSLIEYKTLVMRGDLERANEILPSIPNEHHNSVAHFLESRGMIEDAIEVATDPEYRFDLAIQLGRLEVAKAIAIEVRSESKWKQLGELAMSSGKLEMAEECLEHAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLGKVNPKAAESLADPEEYPNLFEDWQVALAVESKASETRGVYLPAEEYVNHADKSHVTLVEAFRKMQIEEGDQPLENGDSNHELTEQNGEEDYTAGHREQNGEEGSQEDEVVVDADSTDGAVLVNGNEADEELSTNKEGAPSA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05481 359 MobiDBLite consensus disorder prediction 287 359 - -
Vifa2g05481 359 FunFam Coatomer subunit beta 29 237 - -
Vifa2g05481 359 MobiDBLite consensus disorder prediction 287 321 - -
Vifa2g05481 359 Gene3D - 29 237 - -
Vifa2g05481 359 Pfam Coatomer WD associated region 1 202 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05481 Vifa-Chr2 1631187102 1631192298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05481 K17302 - gmx:106794271 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05481 2 1631187102 1631192298 Vifa2g05481 2 1631187102 1631192298 ECH
Vifa5g00160 5 21045616 21058457 Vifa2g05481 2 1631187102 1631192298 PCT