Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05012 ATGGAAATTCCTGATACGGTGATAGTGAACCGGGTCGAACCGGGTTCGAAGGAGAACGGTTTGAGAGCTGAGATCGATACTTCGGCGCCGTTTGAGTCTGTGAGAGAAGCTGTTTCGAGATTCGGCGGTGTTGGGTATTGGAAACCTACTAACAATGTTAACCTCATCACTCCTCAGGAAAACAAAAGCGAGCTTGATGCTGGAAAATTGGAAGAACAAACAGTGGGATTGGAAAAAGAGCTTATACTCAAAGAAAGGGAAACACTTGATGTGTTAAAAGAACTTGAAAGTACGAAAAAGCTTGTTGAAAATTTGAAATCAAAGCTTCATGCAGAAGAATCTGAAGCAAATTTGAATATTAAGATGAATTTATGCGACAAAAAGGAGAATGAGAAAGAAGAAGAAAAGGAAAATCAAGTGAGTCGGGTTTCGTACAATTCAACATCGCCTGGTTTAATATTAAAGGAATTGAAGCAGGCGAAACTGAATTTAAACCGGTCTACGAACGATATCGCTGATGTTCGAGTTTGTGTTGAGTCACTCAATAAGAAATTAGAGAAGGAAAGAATCTCTCTCGAGAAAACGCGTGCGAGGTTGACTCAGAATTCTTCGAAACTAACTTGTCTAGAGGAAGAGCTAAACCAAACAAGACTTAAGCTGCAAGTAGTGAAAGATGCTGAAATCGAATGTGGTTCGGATGAACCTTCTGATGTTACGAAGGAGTTTCAACGGCTGAGTTCCGAGGCAGAATGTTTCAAGAAAATGGGAGAAGCTGCGAAATCGGAAGTCGTGAGAGCAATGTCTGAGATTGAACAGACGAAAGCTATGATAACAACATCCGAAATAAGGTTGGTTGCTGCGCGGAAAATGAAGGAAGCTGCTAAAGCGGCCGAAGCTGCTGCAATGGTTGAGATAAAAGCGCTATCTTATCATGATGGAGATTGTATGCAAAAGCGCGACGGAGTTACTCTAACCTTTGAAGAGTATAATGCTCTAATGTGCAAAGCTCGTGACGCCGAGGAACAATCAAAGAAGAGAGTTGTTGATGCGATGGCTCAAGTTGATAAAGCAAATTTATCGAAAATGGATGTTTTAAAGAGGGTTGAGGAAGCTACATTAGAAATTAAAACAAGCAAAGTGGCTCTTGAAGAAGCTTTGGAGAGAGTAGAGGCTGCAACTCGAGGAAAGTTAGTAGTCGAAGAAGCGTTAAGAAACTGGCGATCAGAGGGTCAAAAAAGGCGATCATCGATGCATAACAATATGAAGTTCAAAAACCCTTCTCACCATCATAAACACGCTCGTTTATTCGATGTATATGGAATGAATCAGGTTGATGATGAAGTTCAACAACCAGTTCTTAAGCCGACTCTATCGATAGGACAAATATTGAGCAGGAAACTGATGAAGCCGGGAGAGTTTGAAGGTGGGATGATACGAGAAAGAGGTTCGATGAAACGGAAAGTGTCGTTGGGTCAGATGCTTGGTAAACAAAACAATGATCCATCATGTTTTGAATTTGAAAAGCAAGTTGAGAAAGAAAATGGTCAGAAGCAGTTTTCTGCTAAGAGAAAGAAATTTGGGTTTGGAAGATTTTCTCTTCATTTGACAAAACAACAAAAGAAGAAAAAACCAACTTTGAACTTGAGGTGA 1650 0.4048 MEIPDTVIVNRVEPGSKENGLRAEIDTSAPFESVREAVSRFGGVGYWKPTNNVNLITPQENKSELDAGKLEEQTVGLEKELILKERETLDVLKELESTKKLVENLKSKLHAEESEANLNIKMNLCDKKENEKEEEKENQVSRVSYNSTSPGLILKELKQAKLNLNRSTNDIADVRVCVESLNKKLEKERISLEKTRARLTQNSSKLTCLEEELNQTRLKLQVVKDAEIECGSDEPSDVTKEFQRLSSEAECFKKMGEAAKSEVVRAMSEIEQTKAMITTSEIRLVAARKMKEAAKAAEAAAMVEIKALSYHDGDCMQKRDGVTLTFEEYNALMCKARDAEEQSKKRVVDAMAQVDKANLSKMDVLKRVEEATLEIKTSKVALEEALERVEAATRGKLVVEEALRNWRSEGQKRRSSMHNNMKFKNPSHHHKHARLFDVYGMNQVDDEVQQPVLKPTLSIGQILSRKLMKPGEFEGGMIRERGSMKRKVSLGQMLGKQNNDPSCFEFEKQVEKENGQKQFSAKRKKFGFGRFSLHLTKQQKKKKPTLNLR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05012 549 Coils Coil 178 226 - -
Vifa2g05012 549 Pfam Weak chloroplast movement under blue light 114 413 IPR008545 -
Vifa2g05012 549 Pfam Weak chloroplast movement under blue light 23 115 IPR008545 -
Vifa2g05012 549 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 23 116 - -
Vifa2g05012 549 MobiDBLite consensus disorder prediction 409 428 - -
Vifa2g05012 549 Coils Coil 368 388 - -
Vifa2g05012 549 Coils Coil 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05012 Vifa-Chr2 1488086037 1488088052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05012 - - psat:127105716 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01282 5 371419658 371422032 Vifa2g05012 2 1488086037 1488088052 PCT