Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04013 ATGGAAGAATTGAATGGAAAAATAGAGGGAAACAATGTTGGAATTTTGAAGGAAGAGGATGTGGAAATCGGAGGTGAATCGGAGACATCCCGAAATGGTCCTGTGAAAGATAAGAAAGTGAAACAAACAAGTGGTAAAGGAGGGCCTATAGGTTTGGTGAGAAAGAACAAAGTTGGGAAAGATGAAGAGGTGGTAGCAGCAGCGGCTGTTTCAAATGGTACTTCTTCCAGTTTAGACTCGAATCCTAGACAGGCGGTTAAGAGCAGAGCGTTGAACTTGAACGACAAACAGACTCGATTGAACAAGCAAGCTGGAAAGTCTGATGCAGCGTCTTCTGAAGCACCAACGGACAAGATTAGACCACAGTTAATAAAGAAAGAACCCCTTGATAATCTTCAAGGAAATGCTGACTTATCTTTTCCTACAGCAGAAGATGGCAAGCCTCGCAGAACGGGGACAATGCCAACTTATGGATTTAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAATTTTACTCTAAGCTTGAGGAAAGGATTCATGCGAAGGAAGTGGAGGAGAGCAACATGCAAGCAAAAACCAAGGAGAGTCAAGAAGCTGAAATTAGGAGGCTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAACCTCCTCCTTCTCGGGTGGAGTTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAAAAGACTTCAACATCTTCAGATCTAGAAGGAAACACCATAAGCAATGCTCAACAATGTCGTTTAAGTCTGGACGAGAAATTATCTCAGAATAACCCCACCAAAGGAATTAGTCCTGTTCACCCAAAGAAGCCACAGCGAAAATCTCTCCCTCCTCGACTGACTCCTGAAAGGATCAGTTCATCCAATACAACCTCTGCACGGACTCCGTCTAAGGCGGTGAACGACGAGAAAGCCTCCTTATCTAGTGTAACAACTGAGGTTACCACCTTGTCTATTGCAACAAAGGAAGATGAAGTTGTAGCAGCTGCAGCTATTGAGGAGAACAATGTCTTGTCCGACGAGACAAGTGAAACTCCGTCTCTGAACATAGATCCAGGTGAAGTAGAATCCCATGTAGTCATTGAAGACAAACCACATCTCACCTTGGTACAAGAACCTATAGCAGCAGAGTATTAA 1197 0.4336 MEELNGKIEGNNVGILKEEDVEIGGESETSRNGPVKDKKVKQTSGKGGPIGLVRKNKVGKDEEVVAAAAVSNGTSSSLDSNPRQAVKSRALNLNDKQTRLNKQAGKSDAASSEAPTDKIRPQLIKKEPLDNLQGNADLSFPTAEDGKPRRTGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNMQAKTKESQEAEIRRLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRKKTSTSSDLEGNTISNAQQCRLSLDEKLSQNNPTKGISPVHPKKPQRKSLPPRLTPERISSSNTTSARTPSKAVNDEKASLSSVTTEVTTLSIATKEDEVVAAAAIEENNVLSDETSETPSLNIDPGEVESHVVIEDKPHLTLVQEPIAAEY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04013 398 PANTHER PROTEIN WVD2-LIKE 4 47 356 IPR044833 GO:0008017
Vifa2g04013 398 MobiDBLite consensus disorder prediction 301 331 - -
Vifa2g04013 398 Coils Coil 174 204 - -
Vifa2g04013 398 MobiDBLite consensus disorder prediction 13 43 - -
Vifa2g04013 398 MobiDBLite consensus disorder prediction 1 159 - -
Vifa2g04013 398 MobiDBLite consensus disorder prediction 246 283 - -
Vifa2g04013 398 MobiDBLite consensus disorder prediction 69 110 - -
Vifa2g04013 398 Pfam Targeting protein for Xklp2 (TPX2) domain 159 229 IPR027329 -
Vifa2g04013 398 MobiDBLite consensus disorder prediction 207 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04013 Vifa-Chr2 1177046909 1177050315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04013 - - gsj:114408962 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04013 2 1177046909 1177050315 Vifa2g04013 2 1177046909 1177050315 ECH
Vifa3g04554 3 1305349364 1305352962 Vifa2g04013 2 1177046909 1177050315 PCT