Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03987 ATGGCCACAATGATCATCGCTTCATCCAAACCAGTAATCAGAATTCCCACAAGCTCCCTCCCCACCACCCCCAAACTCCCCCTCCCAGCGATCACCCCTAACCTCAAACTCCATCTCTCCAAACTCAAATCCCTAACCCTAGCCGCAACTCCCCTCTCTCTCCCCTTCTTGTTGGCACCCCCCTCATTCGCCTTCGAAAAAGCCGCCCTGTTCGACTTCAACCTCACTCTCCCCATCATCGTCGTCGAGTTTCTCTTCCTCATGGTCGCCCTCGACAAACTCTACTTCACACCTCTCGGAAACTTCATGGACGAACGTGACGCCTCCATCCGAGGCAAACTGAACAGCGTGAAGGACACTTCCGAGGAAGTGAAGCAGCTGGAAGATCAGGCCAATGCTGTTTTGAGAGCGGCACGTGCTGAGATCGCAGTGGCGCTGAATCAGATGAAGAAAGAGACGCAGGCTGAAGTGGAAGAGAAGATTGCGGAAGGGAGGAAGAAAGTGGACGCGGAATTGCAAGAGGCGCTGGCCAATTTGGAAAAGCAGAAGGAAGAAACGGTTAAGGCTCTTGATTCTCAGATTTCTGCTCTTAGCCAGGATATTGTTAAGAAGGTTCTTCCCACTGCTTAA 630 0.5206 MATMIIASSKPVIRIPTSSLPTTPKLPLPAITPNLKLHLSKLKSLTLAATPLSLPFLLAPPSFAFEKAALFDFNLTLPIIVVEFLFLMVALDKLYFTPLGNFMDERDASIRGKLNSVKDTSEEVKQLEDQANAVLRAARAEIAVALNQMKKETQAEVEEKIAEGRKKVDAELQEALANLEKQKEETVKALDSQISALSQDIVKKVLPTA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03987 209 Hamap ATP synthase subunit b' [atpF2]. 70 207 IPR034679 GO:0015078|GO:0015986|GO:0045263
Vifa2g03987 209 Pfam ATP synthase B/B' CF(0) 77 206 IPR002146 GO:0015078|GO:0015986|GO:0045263
Vifa2g03987 209 Coils Coil 165 200 - -
Vifa2g03987 209 Coils Coil 110 163 - -
Vifa2g03987 209 Hamap ATP synthase subunit b [atpF]. 71 208 IPR002146 GO:0015078|GO:0015986|GO:0045263
Vifa2g03987 209 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 65 208 - -
Vifa2g03987 209 CDD ATP-synt_Fo_b 76 206 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03987 K02109 - gmx:100527009 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03987 2 1173411647 1173412276 Vifa2g03987 2 1173411647 1173412276 ECH
Vifa2g03987 2 1173411647 1173412276 Vifa3g04559 3 1306720680 1306723078 ECH
Vifa3g04559 3 1306720680 1306723078 Vifa2g03987 2 1173411647 1173412276 PCT