Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03914 ATGGCGTTTTTGAGATCTATCGTTTTCTCCGCAGTTCTCCTCTGTCTCGTTCACTCCGCTTTCTGCTTCTACCTTCCCGGTGTCGCTCCACAGGACTTCGTTAAGGGAGAAGTTTTGGAAGTGAAAGTAAACAAATTAACATCAATAAAGACCCAGCTTCCGTACTCATATTATTCACTTCCTTATACTGCACCCCAAAAAATACAAGATAGTGCAGAAAATCTTGGGGAAGTGCTTCGCGGTGACCGCATTGAGAATTCGCTCTATGTGTTTAAAATGCGCGAGCCACAAATGTGTAATATCGTGGGTAAAGTTAAACTTGATGCTAAAAATGCCAAGGAGTTCAAAGAGAAGATCAATGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAAAGGAATGATCAGGATTCTACCGTCTATCAGCTTGGTTTCCATGTTGGACTCAAAGGACAGTATAGTGGGAGCAAGGAGGAAAAATATTTTATCCACAATCATTTGGCATTTACTGTCAAGTATCATAAAGATGTGCAAACTGAATCTGCTAGAATCGTGGGCTTTGAGGTTAACCCGTTCAGTGTTAAACACGAGCTTGATGGTAAATGGGATGAGCAAAAGACTCGTTTGACAACATGTGACCCTCATACTAAGCACACAGTTATGAACAACAACTCTCCTCAAGAAGTCGAAGAGAACAAGGAAATTATGTTCACATATGATGTTGATTTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATCTGCTAATGAATGATGACCAAATTCACTGGTTCTCTATTGTAAACTCATTAATGATTGTTCTATTCCTTTCGGGCATGGTGGCAATGATAATGCTGAGGACACTTTACCGTGACATTGCAAAGTATAACGAGCTTGAGACCCAGGAAGAAGCCCAAGAGGAGACTGGTTGGAAGCTTGTCCACGGGGATGTATTTAGGCCTCCTATCAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAATTTTTTGGAATGATACTAGTAACCATGATATTTGCCATCCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTCATGACAGCCATGCTCTTGGTTTGGGTTTTCATGGGAATATTTGCTGGTTATTCTTCAACTCGCTTGTACAAAATGTTCAAAGGATCAGAATGGAAAAAAATTGCCCTCAGGACTGCAACTTTGTTCCCTGCAATTGTCTCTGTCATTTTCTTCATATTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCTCTGATCTTCTTATGGTTTGGGATCTCTGTTCCACTTGTTTTCGTGGGTAGCTATATTGGTTTCAGAAAACCCGCAATTGAGAATCCTGTGAAGACAAACAAAATCCCAAGACAGATCCCTGAGCAGGCCTGGTACATGAACCCAGCCTTCTCCGTTTTGATTGGAGGAATACTTCCATTTGGAGCTGTGTTCATTGAACTTTTCTTTATCCTTACCTCAATCTGGTTGAATCAGTTCTACTACATCTTTGGGTTCCTCTTTTTGGTCTTCATCATCCTTGTTGTCACTTGCGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGCGAGGATTACTTGTGGTGGTGGCGTTCATACCTTACGTCTGGTTCATCTGCACTATACCTCTTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTGTCTGCAATATTTTACTTTGGATACATGCTTATAGCTTCTTATGCGTTTTTTGTGGTTACCGGTACTATTGGATTCTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCTTCAGTCAAAATTGATTAG 1911 0.4134 MAFLRSIVFSAVLLCLVHSAFCFYLPGVAPQDFVKGEVLEVKVNKLTSIKTQLPYSYYSLPYTAPQKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNIVGKVKLDAKNAKEFKEKINDEYRVNMILDNLPLVVPIKRNDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHKDVQTESARIVGFEVNPFSVKHELDGKWDEQKTRLTTCDPHTKHTVMNNNSPQEVEENKEIMFTYDVDFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPINSDLLCVYVGTGVQFFGMILVTMIFAILGFLSPSNRGGLMTAMLLVWVFMGIFAGYSSTRLYKMFKGSEWKKIALRTATLFPAIVSVIFFILNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYIGFRKPAIENPVKTNKIPRQIPEQAWYMNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILVVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03914 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 636 IPR004240 GO:0016020
Vifa2g03914 636 SUPERFAMILY MFS general substrate transporter 275 458 IPR036259 -
Vifa2g03914 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03914 Vifa-Chr2 1141938521 1141942077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03914 1 636 Miscellaneous Gene Families AT5G10840 82.226 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03914 K17086 - gmx:100780976 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03914 2 1141938521 1141942077 Vifa2g03914 2 1141938521 1141942077 ECH
Vifa3g04610 3 1319733080 1319737585 Vifa2g03914 2 1141938521 1141942077 PCT