Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03466 ATGGCAGAAGAAAAGAAACAAGAAACAACAGATAGAAAGATGAAGAGAATTCTTCTCGTAATTAACTGTTTATTGTTAGCCTTAGGAAACTCCGGTGGTCCCCTCATAATGCGTCTCTACTTCATCCACGGCGGCCACCGCGTCTGGCTCTCCTGTTTCCTCGAAACCGCCGGTTTCCCTATAATGATCCTCCCCCTCACAATCTCGTACATCAATCGCCGCCGTCTCCACCTAAGTCAGCCACCATCAACCACCACCGAACCCGCTGCAAAGCTAAAAATAATCTCCATGAATACTCCTCTTTTCTTCGCCGTAGCTTTCATCGGAATCCTCACCGGCCTCGACGACTATCTCTACGCATACGGCGTTGCTCGGCTTCCAATTTCAACTTCTGCTTTAATAATCGCTTCTCAGCTTGGTTTCACGGCGGTTTTCGCTTTTCTGCTTGTGAAACAGAAATTCACTGCTTTCTCTGTAAACGCCGTCGTTTTGCTTACAGTTGGAGCTGGAGTTTTGGCTATGCATACTTCTGGAGATCGACCTGCCGGTGTTTCTACGAAGCAATATGTTATCGGTTTTCTCACTACTCTTGCTGCTTCTGCATTATATGGATTTGTTTTGCCTTCAGTTGAATTGATTTATAAAAAAACCAAACAAAACCTTACTTATTCTCTTGTTATGGAAATTCAGTTTGTTATGTGTTTATTTGCTACTCTCTTCTGCACGGTCGGCATGATCGCAAATAATGATTTTAAGGTGATTCCGAGGGAGGCAAGGAATTTTGGACTAGGGGAAAGAACATACTATGTGGTGTTGGTGATGAGTGCAATGTTATGGCAAGCGTTTTTCTTGGGAGCAATTGGAGTTATTTTTTGTGGCTCATCTTTGTTGTCGGGTATTTTGATAGCTGTTTTTTTGCCGGTGACTGAAGTGTTGGCTGTGATTTTCTATAAAGAGAGATTTCAAGCTGAGAAAGGGGTTTCTCTCGTGCTTTCTCTTTGGGGGTTTGTGTCGTATTTCTATGGTGAGATTAAACAGGATAAAGAAAAGAAGAGGAAGCGTGCTATGGAGACAGAGTTGGGTCATAGTCTTGAAGTACTCCCTGCCCCGTGA 1113 0.4367 MAEEKKQETTDRKMKRILLVINCLLLALGNSGGPLIMRLYFIHGGHRVWLSCFLETAGFPIMILPLTISYINRRRLHLSQPPSTTTEPAAKLKIISMNTPLFFAVAFIGILTGLDDYLYAYGVARLPISTSALIIASQLGFTAVFAFLLVKQKFTAFSVNAVVLLTVGAGVLAMHTSGDRPAGVSTKQYVIGFLTTLAASALYGFVLPSVELIYKKTKQNLTYSLVMEIQFVMCLFATLFCTVGMIANNDFKVIPREARNFGLGERTYYVVLVMSAMLWQAFFLGAIGVIFCGSSLLSGILIAVFLPVTEVLAVIFYKERFQAEKGVSLVLSLWGFVSYFYGEIKQDKEKKRKRAMETELGHSLEVLPAP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03466 370 PANTHER OS09G0467300 PROTEIN-RELATED 5 353 IPR030182 GO:0015211|GO:0016020
Vifa2g03466 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 95 176 - -
Vifa2g03466 370 Pfam Purine nucleobase transmembrane transport 17 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03466 Vifa-Chr2 1002640241 1002641524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03466 14 352 Organic Solute Cotransporters AT1G28220 58.407 4.38e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03466 - - gmx:100803818 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03466 2 1002640241 1002641524 Vifa2g03466 2 1002640241 1002641524 ECH
Vifa2g03466 2 1002640241 1002641524 Vifa1g03175 1 496584776 496585584 PCT