Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03175 ATGGGTGTCTTAGGAACAATACTGAGACATTTGGATACAACAATAGGGCCTGGAGTAATGCTTCTTTATCCTTTATATGCATCAATGAGAGCAATTGAAAGTCCATCAACCTTAGATGATCAACAATGGCTAACATATTGGGTTTTATACTCTTTCATAACCCTCTTTGAGCTTTCAACTTACAAGGTCCTATATTGGTTTCCTATTTGGCCATACATGAAGCTTGTGTTCTGCTTGTGGTTGGTGTTGCCAATGTTCAATGGAGCAGCTTACATATACGAGAATTATGTGAGGAAATATGTCAAGAAACTCGGTAACTATGGAGGTTCGAATTATCCTGAGGAGTATAAGAAGGTTCTTCATATGATGACGTTCGATGCAAGAAAAGCAGTTGAACGTTATATTGATAGATTTGGTCCAGATGCATTTGAGAGAGTGATTAGAGCAGCTGAGAAAGAAGCAAAGAAGCATTGA 474 0.3819 MGVLGTILRHLDTTIGPGVMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSTYKVLYWFPIWPYMKLVFCLWLVLPMFNGAAYIYENYVRKYVKKLGNYGGSNYPEEYKKVLHMMTFDARKAVERYIDRFGPDAFERVIRAAEKEAKKH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03175 157 PANTHER HVA22-LIKE PROTEINS 19 114 IPR004345 -
Vifa1g03175 157 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03175 Vifa-Chr1 496584776 496585584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03175 K17279 - gmx:100779435 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03175 1 496584776 496585584 Vifa1g03175 1 496584776 496585584 ECH
Vifa1g03175 1 496584776 496585584 Vifa1g03175 1 496584776 496585584 PCT
Vifa2g03466 2 1002640241 1002641524 Vifa1g03175 1 496584776 496585584 PCT