Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03446 ATGAGTACTCCAAGAGTCCGAGGGAGAAAAATCATTATCAACTTAGGTGATTTTAGTGTTTTTTCATCAAAAGGATTAATGCAGAAGCGTAAAAAAATTCCTTTGAGCATTATATTATGGAGATTTCTTGGTGCAACCGTTTTCTCAATAGCTATCACTTGTTTCTTCTTTGTTCATCATGTTCATGTATCCACTACTTCGAAAATTCATCATAAAAAGTTCAATGAAAAGATTCACACGTTTCGTGACCTGCAAAGCTGGACCCAAGAGCTTGATCCGCTTCATTTATCTAAGGATTCAGTCTCTGCTTCTAAGCTGAATAATACAAGAGAGATTACAAAACTAAACTATGAGAAACTCTGGAAGCCTCCACCTAATCATGGATTTCTACCTTGTACAAAACCTTCCCTTAATTACACAACTCCTGAAAACTCGCGTGGTTACCTTCTAGTACATACAAATGGTGGACTCAACCAAATGCGCATTGGGATATGTGATATGGTAGCAATAGCTCGCATTATAAACGCCACCCTTGTAATTCCAGAGCTTGACAAAAAGTCATTTTGGAAAGATAATAGCAATTTCTCTGATATCTTTGATGAAAAGAGGTTTATCAGTACTCTTGCTGATGATATAAAAATCATCAAGAAACTTCCCAAGAATCTGGCTAATGCAACCAAAATGGTGAAGCAGTTCAAAAGCTGGTCTGGTATAGAGTACTATCAAAAAGAGATTTCAGTCCTTTGGAATGATTTCAAAGTTATTCAAGCTTCCAAAACCGATTCTCGATTAGCGAATAACAATCTACCTCTAGATATTCAAAAGCTTCGTTGTCGTGCTTGTTTTGAAGCTCTTCGTTTCTCTCCTCGCATTGAAAAGATGGGAAAATTATTGGTGGAGAGGATGAGATCATTTGGTCCTTATATCACATTACACTTACGTTACGAGAAGGATATGCTTGCATTTAGCGGATGCACGCACGATTTATCAACTTCTGAGGCCGAAGAACTACGAATTATCAGAGAGAATACTACTTATTGGAAAAGAAAGCATATCAATCCTACTGAAGAGAGGTCTAAAGGGAATTGTCCCTTAACTCCAAAGGAAGTTGGAATTTTCCTTAGTGCTCTTGGATACCCTACAAGGACTCCTATATATATTGCTGCAGGGGAGATATATGGGGGTGAGTCTCATATGACTGAACTGCAATCGCGATATCCGTTTTTAATGAGCAAGGAAAAGTTGGCATCTATTGACGAACTTGAACCATTTTCAAATCACGCATCTCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGCGATGTGTTTGTACATTCTTACCCTGGAAACATGGCACGGATTGTTCAAGGTCATCGTCGTTTTCTTGGGAAAGGAAGAACCGTATCTCCAGATAGGAAAGCTCTCGTTCGTCTGTTTGATAAACTAAAAAATGGATTAATGGTTGAGGGGAAAAAGCTGTCCAATAAAGTGAATGGTCTTCACCAAGGAAGGGTTGGCTTGTTAAGGAAGAGAAAAGGGCCGATTTCTGGAACAAAGGGTGTCGACAGGTTTCGATCAGAAGAAACATTTTATGCAAATCCTTTACCTGAATGCTTATGTCGGGCAGAATCATCTCCGATATAG 1650 0.3855 MSTPRVRGRKIIINLGDFSVFSSKGLMQKRKKIPLSIILWRFLGATVFSIAITCFFFVHHVHVSTTSKIHHKKFNEKIHTFRDLQSWTQELDPLHLSKDSVSASKLNNTREITKLNYEKLWKPPPNHGFLPCTKPSLNYTTPENSRGYLLVHTNGGLNQMRIGICDMVAIARIINATLVIPELDKKSFWKDNSNFSDIFDEKRFISTLADDIKIIKKLPKNLANATKMVKQFKSWSGIEYYQKEISVLWNDFKVIQASKTDSRLANNNLPLDIQKLRCRACFEALRFSPRIEKMGKLLVERMRSFGPYITLHLRYEKDMLAFSGCTHDLSTSEAEELRIIRENTTYWKRKHINPTEERSKGNCPLTPKEVGIFLSALGYPTRTPIYIAAGEIYGGESHMTELQSRYPFLMSKEKLASIDELEPFSNHASQMAALDYIVSIESDVFVHSYPGNMARIVQGHRRFLGKGRTVSPDRKALVRLFDKLKNGLMVEGKKLSNKVNGLHQGRVGLLRKRKGPISGTKGVDRFRSEETFYANPLPECLCRAESSPI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03446 549 PIRSF UCP009360 17 546 IPR024709 -
Vifa2g03446 549 Pfam GDP-fucose protein O-fucosyltransferase 148 463 IPR019378 -
Vifa2g03446 549 PANTHER OS02G0726500 PROTEIN-RELATED 47 543 - -
Vifa2g03446 549 CDD O-FucT_plant 148 469 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03446 Vifa-Chr2 995093430 995098614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03446 90 547 Miscellaneous Gene Families AT1G22460 65.066 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03446 - - tpra:123918053 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03446 2 995093430 995098614 Vifa2g03446 2 995093430 995098614 ECH
Vifa1g00572 1 98333032 98337003 Vifa2g03446 2 995093430 995098614 PCT