Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03405 ATGTCCCAACACAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCTTTTGTGTGCTTTCTGGCACCACTACCAACATTCTATAGAGTTTGTAAGAAGAAATCAACAGAAGGGTTTCAATCCATTCCCTATGTGGCTGCATTATTCAGTGCAATGCTTTGGCTTTTTTATGCTTATATCAAGACAGGAGAAACTCTTCTTATCACAATCAATGCATTTGGTTGTGTGATAGAAACTGTTTACCTAGCCATTTATGTCACTTACTGTCCCAAGAAAATTAGGATGTTCACATTGAGGATGATTGTGTTGATGAATTTCGTCGGATTCGGCACGATTGCCGTCTTAACTTATGTCTTAGCAAAAGAAGAAGAAGGACGTATCAAAATTCTTGGATGGATTTGTGTAGTTTTTGCTACTAGTGTTTTTGCAGCACCTTTAAGTATTATTAGAGTTGTTATTCGTACCAAAAGTGTAGAGTTTCTTCCTTTTCCTCTTTCGCTTCTTCTCCTCATAAGCGCGGTTATGTGGCTCTTGTATGGTCTTTCTCTCAGAGATATCTATGTTACCCTTCCGAACGTTGTGGGGTTAACATTTGGAATAGTTCAGATCACACTGTATCTTATATACAGAAAAAGTACGCCAGTAAATGATGAGAAGCTTCCGGAACATAAAGGAGATGTTGCTATGAGCAATGAAATAGAAAGCGCGGTTCCTGCTAATGGTACTTCAGATGAGAAGAAAATTGAAGCGAGTGTTGAAACAGAGATTGTGAGAAAAAAAGAAGAGACAGAAGAAGAACATGACGATGAAGAGAAGAAAGAGGAGGAAGTAGATGAGGAGAAAAGGGAGGTAAAGAATGAGAAAGACAACATTGATGTCAGCAAAAGTGGTTGTGAAGTTTAA 912 0.3827 MSQHSHLSFAFGVLGNISSFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWLFYAYIKTGETLLITINAFGCVIETVYLAIYVTYCPKKIRMFTLRMIVLMNFVGFGTIAVLTYVLAKEEEGRIKILGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLISAVMWLLYGLSLRDIYVTLPNVVGLTFGIVQITLYLIYRKSTPVNDEKLPEHKGDVAMSNEIESAVPANGTSDEKKIEASVETEIVRKKEETEEEHDDEEKKEEEVDEEKREVKNEKDNIDVSKSGCEV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03405 303 FunFam Bidirectional sugar transporter SWEET 9 97 - -
Vifa2g03405 303 Coils Coil 256 293 - -
Vifa2g03405 303 Gene3D - 128 222 - -
Vifa2g03405 303 MobiDBLite consensus disorder prediction 280 303 - -
Vifa2g03405 303 Gene3D - 10 95 - -
Vifa2g03405 303 MobiDBLite consensus disorder prediction 241 303 - -
Vifa2g03405 303 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016020
Vifa2g03405 303 Pfam Sugar efflux transporter for intercellular exchange 132 215 IPR004316 GO:0016020
Vifa2g03405 303 PANTHER RAG1-ACTIVATING PROTEIN 1 13 267 IPR047664 -
Vifa2g03405 303 MobiDBLite consensus disorder prediction 249 269 - -
Vifa2g03405 303 FunFam Bidirectional sugar transporter SWEET 129 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03405 Vifa-Chr2 981619158 981620485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03405 8 285 Miscellaneous Gene Families AT5G50800 50.000 1.99e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03405 K15382 - gmx:100810426 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03407 2 982467636 982469481 Vifa2g03405 2 981619158 981620485 PCT