Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03298 ATGTTGAACGTGGATCTACCTATAAATAATCAAGAGTTTGATAGATTCAATTTATTGGTACCATTTTCGCAACTCATGGGATTCCTTAAGAAAAAGAAAAGTCCTACCACAGTCAACCAGGACGAAGTTTTCTACGACGGGATCCCACGTTACGTCGAGGTGGACCGCGTCTTTGCCAACTCCGATGTCACCGCGCCGCCTGAGTTTCCCGAAATCACGGAGTCACCGCCGACGATGTTTTTTACGACGGAATCCCACGCTATGCCTACAAGCTTTAGCTCAAAGCAACCTACCGTTGTATCGGATGTGAGTTCACGTTTGGGAAGAGCTACTAGACCAGGGAAAGTATTGGGTTTTTGGGACAGTTTTGGAAGCGCTAGCAGTAAGTTTGTTTCGGGGACTACAATTTCCATCTTAGCATTTGAGGTTGCAAACACTATTATCAAAGAGGCTGTCCATGATCTAGTGTCTAAGGATAAGGATGAGCTTCTTAGGATTGTTGCCGCTGACAAGTTGCAGGAGTTGAAACTTTTTCTTGATGAGGTGACTCGTTTTGGAAATCGTTCAAAGGATCCTCAATTGCGCAACTTAGATCTTTACTTTGAGAAGATTAGCAATGAATCAAGTGCTCAAAGACTCTCGAGAGATGAGGCAGAATCATTAATGCAAGAACTGATGACTTCGGCCCAATTTACAGTTGAGTTGTACCATAAACTTTCTGCGCTGAATAGACTTGAAGAAGATTTTTTGCTTAAGGGTGAAAAGGAGAATCAAAGAGGTGATAACCTTGCATTCTTGAGAGCAACATTTAAAAGTCAAAGGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTGTAGAAGTTTGGAGGAGGTTATTGAGAAGCTTAGTGATATTGTCCTTTTTATACATTTAGAGATACGCAATAGCTTCGGGAGTGCAGTTTGTAGTGAAAGATGTATTTTGCATGCACGGGTACATGCAGATGGCCAAAAACCAATAATTGTACACATTGGCGATCGCCAAAGATTGGGCACCGCTGGCCTTGCGTTGCATTATGCAAATATAGTGCTTCAAATTGACACCCTTGTAGCCAGGTCTATTTCTATGCTTGCAAATAGAAGGGATTCATTGTATCAAAACTTGCCGCCCAATATTAAATCAACTTTGCGTTCCAAATTACCATCCTATCATGCTGTAGAAGAGCTAACTGTAGCAGAAATCAAATATGAGATGGAGAAAACATTACATTGGTTGGTTCCAATTGCCGCAAACACATCCAAAGCACATCATTGTTTTGGTTGGTTAGGGGAGTGGGATAACACAGCCTCTGAAGTGGATAAGAAAGTTTTCCAGGGCGGTGTAATGCGGATCGAGACATTCCACTATGCCTATAAAGACAAAGTAGAACATTATATTCTTCAACTTCTCTTATGGCTTCACCGCTTGGCCATCAAAAGCAAGATTGGTAATAGGGGTTTGCATGGTTCATAA 1497 0.4142 MLNVDLPINNQEFDRFNLLVPFSQLMGFLKKKKSPTTVNQDEVFYDGIPRYVEVDRVFANSDVTAPPEFPEITESPPTMFFTTESHAMPTSFSSKQPTVVSDVSSRLGRATRPGKVLGFWDSFGSASSKFVSGTTISILAFEVANTIIKEAVHDLVSKDKDELLRIVAADKLQELKLFLDEVTRFGNRSKDPQLRNLDLYFEKISNESSAQRLSRDEAESLMQELMTSAQFTVELYHKLSALNRLEEDFLLKGEKENQRGDNLAFLRATFKSQRKQIKHLKKKSLWCRSLEEVIEKLSDIVLFIHLEIRNSFGSAVCSERCILHARVHADGQKPIIVHIGDRQRLGTAGLALHYANIVLQIDTLVARSISMLANRRDSLYQNLPPNIKSTLRSKLPSYHAVEELTVAEIKYEMEKTLHWLVPIAANTSKAHHCFGWLGEWDNTASEVDKKVFQGGVMRIETFHYAYKDKVEHYILQLLLWLHRLAIKSKIGNRGLHGS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03298 498 Coils Coil 263 283 - -
Vifa2g03298 498 PANTHER OS01G0873900 PROTEIN 150 490 IPR045021 GO:0045927
Vifa2g03298 498 Pfam Protein of unknown function (DUF668) 344 428 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03298 Vifa-Chr2 947795926 947799458 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03298 - - gmx:100779607 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03295 2 947286870 947301864 Vifa2g03298 2 947795926 947799458 PCT