Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03295 ATGGAAACTGATTCAAATTCCAAGATTCAATTATTGGTTTGGTTTTCTCAACTCATGGGAGGTCTTTGTTCTAGGTCCGCCGAAGTTGACCGCGTCTTTGCCAGCTCCGATGCCGATTCCGATGCCTCTCATAAACCTAATACTAACAACAACCCCGCTGATTTCACAACGCCGCCTCAAGTGCGTGAGATCATGGAGAGAAACCCTGCCGGAGCAACCGCTGATGACGTTTTCTATGACGGAATCCCACGCTACGCCGCTAAAGTCTCGGAGGTGAGTTCGCGTTTGGGAAGAGCTGGATTGGGGAAGGCGGTGGAGGTTTTGGACAATCTTGGGAGCAGCATGGCAAATTTAAATGCTGGGAGTGGGTTTGTTTCTGGAGCTGCATTAAAGGGGAGTGAAATTTCCATCTTAGCGTTTGAGGTTGCAAATACTATTGTCAAAGAGGTTGTGCATGATTTAGTGTCAAAGGATACAGATGAACTTCTTAGGATTGTTGCCGCAGATAAGAGGCAGGAATTGAAAGTTTTTTCTGACGAGGTGATTCGTTTTGGAAATCGGTCAAAGGATCCTCAGTGGCACAACTTAGACCGTTACTTTGAGAAAGAATCAAATGCTCAAAGACTCTCAAGAGACGAGGCAGAATCAATAATGAAACAATTGATGAATTCAGTTCAATTTACAGCTGAGTTGTACCACGAACTTCATGCGTTGGATAGATTTGAACAAGATATTGAACATAAGGGCGAAGAGGAAGATCAAAGAGGTGATAACCTTGCATTCTTGAGAGCAGAAATTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTGTAGAAGTTTGGAGGAGGTTATTGAGAAGCTTGTAGACATTGTCCATTTTTTACATTTGGAGATAAGCAATAACTTTGGGAGTGCAGATAGCCAAAAGCCAATAATAGGAAACATTGGCAATCGTCAAAGATTGGGCCCTGCAGGTCTTGCTTTGCATTATGCAAATATAGTACTTCAAATTGATACCCTTGTAGCCAGGTATATTGCTATGCCTGCAAATACAAGGGACACATTGTATCAAAACTTGCCCCCTAATATAAAATCAGCTTTGCGTTCCAAGTTATCATCCATTCATGTTGTAGAAGAGATAACTGCAGCGAATATCAAAGACGAGATGGAGAAAACATTACATTGGTTGGTCCCAATTGCCACAAACACATCTAAAGCACACCATGGTTTTGGCTGGGTGGGGGAGTGGGCTAACACAGGCTCTGAGGTGGATAAGAAAGTTTTCCAGGGTGGTGCAATGCGAATTGAAACATTCCACTATGCTGATAAAGACAAAGTAGAACATTATATTCTTGAACTTCTCATATGGCTTCACCGCCTGGCCATTAAAGTTAAGTCTGGCAGTGATGCTGGCAAAGCGAGGCCTGCCATGAAATCCTCTGTCGGGGCTACCATGGAAAAGACAAATAAGCATTCTACAAATTTAACAATGGATGAGCAAAACATGCTGCAGAATGTAAGTAAGAAATCCAAAATGAAAGGAATCAGTAAGAGCTTGGACTTTGACAGTCTGAAGCCTACATTGAGTGAGAAGTGCAGACTGACCAAAAGTAGCAGTCTTTCATCAAGTAAAAGCAAGGAATCGTCTTTTAATAGGATTTCGTCAAAGCTTCCCGTGATTGATTTTGATATTGACAAAGAGCGAGCGTTGAACGTGATCGACAGACTAGATGTGGTCAGATAA 1761 0.4196 METDSNSKIQLLVWFSQLMGGLCSRSAEVDRVFASSDADSDASHKPNTNNNPADFTTPPQVREIMERNPAGATADDVFYDGIPRYAAKVSEVSSRLGRAGLGKAVEVLDNLGSSMANLNAGSGFVSGAALKGSEISILAFEVANTIVKEVVHDLVSKDTDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKESNAQRLSRDEAESIMKQLMNSVQFTAELYHELHALDRFEQDIEHKGEEEDQRGDNLAFLRAEIKSQKKQIKHLKKKSLWCRSLEEVIEKLVDIVHFLHLEISNNFGSADSQKPIIGNIGNRQRLGPAGLALHYANIVLQIDTLVARYIAMPANTRDTLYQNLPPNIKSALRSKLSSIHVVEEITAANIKDEMEKTLHWLVPIATNTSKAHHGFGWVGEWANTGSEVDKKVFQGGAMRIETFHYADKDKVEHYILELLIWLHRLAIKVKSGSDAGKARPAMKSSVGATMEKTNKHSTNLTMDEQNMLQNVSKKSKMKGISKSLDFDSLKPTLSEKCRLTKSSSLSSSKSKESSFNRISSKLPVIDFDIDKERALNVIDRLDVVR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03295 586 Coils Coil 259 279 - -
Vifa2g03295 586 PANTHER OS01G0873900 PROTEIN 56 149 IPR045021 GO:0045927
Vifa2g03295 586 MobiDBLite consensus disorder prediction 36 58 - -
Vifa2g03295 586 MobiDBLite consensus disorder prediction 40 57 - -
Vifa2g03295 586 Pfam Protein of unknown function (DUF668) 326 410 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03295 Vifa-Chr2 947286870 947301864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03295 - - gmx:100779607 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03295 2 947286870 947301864 Vifa2g03295 2 947286870 947301864 ECH
Vifa2g03295 2 947286870 947301864 Vifa2g03298 2 947795926 947799458 PCT