Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03093 ATGGAGGAACCAAGATCTTCATCACCCGCTTCAACATCTCATAATTCTACAACTTCAACAACAACAACAACATTACCATCTCCACCACCACTTCCTCAAAGTATCTCCCTCATTCAACCCTCTCAAAAAAAAAAACATAAACCAAAAGTCATTCGTGTCTTCCGCTCCGTGTTCCGTTCCTTTCCAATTATAACCCCCGCTTGCAAATTCCCTACAATCCCAACAGGGCCCAACGACGCTCACCACCACCATCACCACAAAAACATCGGTGGAAGCATTGGGACAAAAGTATCTGGAACGTTATTCGGTCATCGTAAAGGACGCGTTAGTCTCTCCGTTCAAGAGAATCCAAAGTGTCTACCTTCATTGGTCATCGAACTTTCAATGCAAACAAGCGTGTTACAGAAGGAAATGGCGGCAGGAATGGTGAGAATTGCACTGGAATGTGAAAAAAGGCAAGAAAAAGATAAGACATTGTTGGTTGAAGAACCGTTATGGACAATGTATTGTAATGGGAAGAAAACGGGTTATGGTGTGAAGAGAGAAGCCTCAGAAGAGGATCTACATGTTATGGAGCTTCTTAAAGCTATAACAATGGGTGCTGGTGTTGTTCCAATGAAAAATGAAGTTGACGATGTTGATGGAGAATTGGCTTATATGAGAGCTTCTTTTGAACATGTAGTTGGTTCTAAGGATTCTGAGACTCTTTATATGTTGAGTCCTGAGGGAAATAATCCTGGGCCTGAACTTTCTATATTTTTTGTGAGGATTTAA 774 0.4147 MEEPRSSSPASTSHNSTTSTTTTTLPSPPPLPQSISLIQPSQKKKHKPKVIRVFRSVFRSFPIITPACKFPTIPTGPNDAHHHHHHKNIGGSIGTKVSGTLFGHRKGRVSLSVQENPKCLPSLVIELSMQTSVLQKEMAAGMVRIALECEKRQEKDKTLLVEEPLWTMYCNGKKTGYGVKREASEEDLHVMELLKAITMGAGVVPMKNEVDDVDGELAYMRASFEHVVGSKDSETLYMLSPEGNNPGPELSIFFVRI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03093 257 PANTHER PROTEIN MIZU-KUSSEI 1 19 257 IPR006460 GO:0010274
Vifa2g03093 257 Pfam Protein of unknown function, DUF617 97 256 IPR006460 GO:0010274
Vifa2g03093 257 MobiDBLite consensus disorder prediction 1 48 - -
Vifa2g03093 257 MobiDBLite consensus disorder prediction 1 24 - -
Vifa2g03093 257 NCBIfam uncharacterized plant-specific domain TIGR01570 97 257 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03093 Vifa-Chr2 885094336 885095109 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03093 - - gmx:100792553 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03093 2 885094336 885095109 Vifa2g03093 2 885094336 885095109 ECH
Vifa2g02541 2 671499218 671499946 Vifa2g03093 2 885094336 885095109 PCT