Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02541 ATGGCCTACATCACCAAGCTAGATGTTGGCACCAGCATGACCTCAGTAGATTGCCAGAAACAAGTTCGTTCATGGAGGCTTCTACGTTCACTCATTCAACTACTAATCCCCACTTGCAACTGCATCTTAGTAGAACAAGAACAAGAACAAGAACAAGAACCAGATTACAACAACAATTCAAGAAACTGGCACAAAAAATATCCATCATCACATTCACTCATTCCCTCTACAACAATCACCGGCACGATATTCGGATACCGTAAAGGAAAAGTAAGCTTTTGTATCCAATCCAACTCCAGCTCCACAAACCCAATTCTCCTTCTACAACTAGCCATCCCAACGAGTGTTTTAGCTAAGGAAATGAGAGGTGGAACTTTAAGAATCGTTCTTGAAAGTGTCGCTTCAGGCTCCTGCAGTAACAGTGATGACCTATTTTCAACTCCTCTTTGGATCATGTACTGTAACGGAAGAAAAGTTGGGTATGCTGTTAAGCGTAAGGCTTCGAGAAGTGATTTTGAAGCATTGAGTTTGATGCGGTGTGTTTCTGTGGGCACTGGTGTTATAAACCGAAAGGAGAGTTGTAAACAAGATGATCAGCTTATGTTTCTTAGAGCTAATTTCCAAAGGGTTTCTGGCTCATCTAAAACTAATTGTGAATCTTTTCATTTGATTGATCCTGAAGGAAGCATTGGACAAGAGCTTAGTATTTTCTTTTTTCGATCAAGGTGA 729 0.406 MAYITKLDVGTSMTSVDCQKQVRSWRLLRSLIQLLIPTCNCILVEQEQEQEQEPDYNNNSRNWHKKYPSSHSLIPSTTITGTIFGYRKGKVSFCIQSNSSSTNPILLLQLAIPTSVLAKEMRGGTLRIVLESVASGSCSNSDDLFSTPLWIMYCNGRKVGYAVKRKASRSDFEALSLMRCVSVGTGVINRKESCKQDDQLMFLRANFQRVSGSSKTNCESFHLIDPEGSIGQELSIFFFRSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02541 242 NCBIfam uncharacterized plant-specific domain TIGR01570 79 241 IPR006460 GO:0010274
Vifa2g02541 242 PANTHER - 10 242 - -
Vifa2g02541 242 Pfam Protein of unknown function, DUF617 79 240 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02541 Vifa-Chr2 671499218 671499946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02541 - - gmx:100805400 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02541 2 671499218 671499946 Vifa2g03093 2 885094336 885095109 PCT