Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03087 ATGGCTACATCTTCTCTTCTACACTTACCCGAACTCCATTTTCTCTCTCCACTAACCCCTCACCGTAACCGTTTCTCTCTTTCTACACACTCCATTTCCCGCCTTTCTACTTTCAATGCCGCTCTTCGCACCGCGCGAATCCGCGCCTCGAAAGAAGATTCGGCGTTAGCCGAGCGAGTTAACGACGTGGAGTGGAGCGGTAACGGAGCAGCCTCCAGCGGATATGTTAACGGCGCCGTCAACAGAAGCTCGGTGGAGTACGGTTATGGAAACCGTGTAGCTGCTATGGAGGTGGTGGATGTTGAAGCGTCCAAGGTGAGTGAGGATGGGAGGAAGAGAAGGTTGGAGGAGATTGGAAAAGAAGACGCGTGGTTTAAACAAACTGAGAAAGTAAAAGTTGAGGTAGCAGTTGCTCCTGGAGGTCGTTGGAGCAGATTCAAGACTTACTCTACAATCCAAAGAACCTTGGAAATTTGGGGATTTGTTGTAACCTTCATCTTTAAGGCATGGCTGGATAATCAGAAGTTTTCTTACAAAGGAGGAATGACTGAGGCAAAAAAGAAGTTAAGGCGGAAGACCCTTGCCAAGTGGCTTAAGGAAAGCATTTTGAGATTAGGTCCTACATTCATTAAAATTGGTCAGCAGTTCTCCACTAGGGTGGATATTCTTCCTCAAGAATATGTTGACCAGTTGTCCGAACTTCAGGATCAAGTGCCTCCATTTCCCTCTGAGACTGCTATAGCCATTGTTGAAGAGGAGCTCGGAGCTGCTGTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGGGCAAGATTGAAGGGACAAGAGGTTGTTGTTAAAGTGCAAAGGCCAGGTCTCAAGGATCTTTTTGATATTGATCTAAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAGTCGGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACTAAGGAGGCTGCTAATGCTGAATTGTTTGCAAGTAACTTTAAGAACATGAGTTATGTGAAAGTTCCTACAATCAATTGGGATTATACCACGCCACAGATTCTGACAATGGAATATGTTCCAGGAATTAAAATAAACAAGATACAAGCTTTAGATCAACTTGGTGTTGATCGCGCAAGGCTAGGGAGATATGCAGTTGAGTCGTTCTTGGAACAAATTTTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGGTTGATCTACTATGATTTTGGAATGATGGGAAGTATTAGTCCAAACATCCGAGAAGGCTTGCTTGAAACGTTTTATGGAGTCTATGAGAAGGATCCAGATAAGGTTCTTCAATCGATGGTTCAAATGGGTATTCTTGTCCCTACTGGAGATATGACTGCTGTTAGGCGAACAGCACAGTTCTTTCTTAACAGCTTTGAGGAGCGCCTGGCTGCACAGAGAAGAGAGAAAGAGGAAGCAACCGGCGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATAATGAAGAAGAAACAACGTCTAGCTGCTATTGGTGAGGATTTATTATCCATTTCAGCCGATCAACCCTTCCGATTTCCTGCTACATTTACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGCCTTGACCCACGTTTTGACATTACTGAGATTGCCAAACCTTATGCTTTGGAGTTATTAAGGTTTCGTGAGGCAGGGGTTGAAGTTGTCTTAAAGGACTTCAGTAATAGATGGGATAGACAATCTCAAGCATTTTACAACTTATTTAGGCAGGCTGACAGGGTTGACAAGCTTGCTACAGTTATCCAAAGACTGGAACAAGGAGATCTAAAGCTCCGAGTTCGAACTTTAGAATCTGAAAGGGCATTCAAACGTGTTGCCACAGTCCAGAAGACTATAGTAAATGCAGTAGGTGCTGGAAGCTTAATAAATCTTGGGACAATTTTGTATCTTAATTCGATTCGTATGCCTGCAATTGTAGCATATGTCTTCTGTGCATTCTTTGGTTTCCAAGTGCTCTTGGGCATTGTAAAGGTCAAGAAGCTAGATGAAATGGAACGATTGATAACAGGAACAGCTTAA 2208 0.4303 MATSSLLHLPELHFLSPLTPHRNRFSLSTHSISRLSTFNAALRTARIRASKEDSALAERVNDVEWSGNGAASSGYVNGAVNRSSVEYGYGNRVAAMEVVDVEASKVSEDGRKRRLEEIGKEDAWFKQTEKVKVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVVTFIFKAWLDNQKFSYKGGMTEAKKKLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAIAIVEEELGAAVGDIFDQFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMSYVKVPTINWDYTTPQILTMEYVPGIKINKIQALDQLGVDRARLGRYAVESFLEQILSHGFFHADPHPGNIAVDDVNGGRLIYYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQSMVQMGILVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEEATGELGFKKPLSKEEKIMKKKQRLAAIGEDLLSISADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFSNRWDRQSQAFYNLFRQADRVDKLATVIQRLEQGDLKLRVRTLESERAFKRVATVQKTIVNAVGAGSLINLGTILYLNSIRMPAIVAYVFCAFFGFQVLLGIVKVKKLDEMERLITGTA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03087 735 Pfam ABC1 atypical kinase-like domain 233 481 IPR004147 -
Vifa2g03087 735 SUPERFAMILY Protein kinase-like (PK-like) 235 477 IPR011009 -
Vifa2g03087 735 Coils Coil 505 525 - -
Vifa2g03087 735 CDD ABC1_ADCK3-like 234 482 - -
Vifa2g03087 735 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 110 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03087 Vifa-Chr2 881861881 881876536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03087 - - gmx:100801705 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03087 2 881861881 881876536 Vifa2g03087 2 881861881 881876536 ECH
Vifa2g03087 2 881861881 881876536 Vifa3g00306 3 35433284 35448918 PCT