Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02047 ATGAAAATGCACTTCATCTTCTTGTTCTTCTCACTCTCTTTTTTCCATGGTTTTATAGCAACCATTGGCAGCAAGGAAATCACTGAAACACAAGAACATTCATTCAAACTAAAGACAAACCCTTTCAGTCCCAAAGCCTCACTCATTCGTCACTGGAACACAAGAATCTCTAACAACCTTCCAAATTCAATCCCTAATTTCTTTCTCTCTAAAGCTTCCCCTCTCACACCACAACACTACGCCAACTTAGTAAATCTCCTTAAACAAAAGCCCTTATCTGCAAATTTCCATAATTCCCTCTGCTCCACACCATACTTATTCTGCTCCTTCGACCACCCAAACCAATATTACCAATCCAAAAAAAACACCAAAGATGATGCCAACTTCGCAGTCTACTCAAACAAAAAATTCGCAGCTTATGGATCGTCTCGACTCGGCGGAGTCGACTCGTTCAAAAACTATTCAAACGGGTTAAACACAAACAACGACTCGTTCAAGAAATACAGCACAACCTCATCTCGCCATACCGGACAATTCAACAGCTACGCGGAAAACGGCAATGTAGCTAACACAAACTTCACCAGCTACGGTTCCGGTTCAAATTCCGGCACCGGCGAGTTCAAAAGCTATGATAAACTCGTCAATGACCCTAACCTAGGTTTCACCACCTACGACTCCTCCGCTAGCAACCACAAACTCTCTTTCTCAAGCTACGGCAATGAAACAAACTCTGGATCAGAATCATTCAACAGCTACGGCAAACACGTTCGCAGCGGCAACAGCGATTTCACCAATTACGCTGTGAGTTCCAACATTCTTCAATCCTCTTTCACCGGCTACGGCGAATTAGGAACCGGAGCCGCCAATGATTCTTTCACATCGTACAGTTTCAACGGTAATAATCCCCGGAGCACTTTCAAAACCTACGGCGCCGGTTCGATTTCTGGCTCCGATACTTTCGTCAGTTACCGGAATCGCGCCAACGTCGGCGATGATTCATTTCAAAGCTACGGTTCAAAATCCAAATCCGGAAGTGCGTCGTTCACGAACTATGGCCAATCGTTCAACGAAGGAAACGACACTTTCACTGAATATGGAAAAGGTTCCACTGGTAAAACCGCGTTTGGATTCAAAATTTACGGATTGGGACGCGCGTTCAAAGGCTACAACAAAAACGGCGTGTCGTTTTCTAGCTACAACAATTTCAGCTTATCCAGTGGCAAAATCGTGAATAAATTCGTTGAGCCGGGTAAGTTTTTCAGAGAGTCAATGTTGAAAGAAGGAAATGCGATGGTTATGCCAGATATTAGAGATAAAATGCCTAAGAGGTCGTTTTTACCCCTATCCATTTCTTCGAAATTACCATTTTCATCATTGGTGTTGGAGGATATTAAGAAAACTTTCCACGCGCGGGAGGGATCTGCGACAGAGCGCGTGATAACAAACGCGCTTGGAGAGTGCGAGAGGGCTCCGAGCGTGGGCGAGACAAAACGGTGCGTTGGATCCGCTGAGGCTATGATTGATTTTGCGGTTTCTGTAATGGGTCCCAATGTGGTTGTGAAAACAACTGAGAATGTGAATGGGTCAAAAAAGAGTGTGATGATTGGAAAAGTCTATGGAATCAACGGTGGAAAAGTGACTAAATCGGTTTCATGTCATCAAACTCTGTACCCTTATTTATTGTACTATTGTCACTCTGTCCCTAAAGTGAGAGTTTATGAAGCTGAGATTCTTGACGTAGAAACTAAGTTAAAGATTAATCACGGTGTTGCCATCTGTCATATGGACACGTCAGCATGGGGCCCACAACATGGTGCTTTTACAGCTTTGGGGTCGGAACCTGGGAAAATTGAGGTTTGCCATTGGATTTTCGAGAATGATATGACGTGGACCATAGCTAGTTGA 1905 0.4404 MKMHFIFLFFSLSFFHGFIATIGSKEITETQEHSFKLKTNPFSPKASLIRHWNTRISNNLPNSIPNFFLSKASPLTPQHYANLVNLLKQKPLSANFHNSLCSTPYLFCSFDHPNQYYQSKKNTKDDANFAVYSNKKFAAYGSSRLGGVDSFKNYSNGLNTNNDSFKKYSTTSSRHTGQFNSYAENGNVANTNFTSYGSGSNSGTGEFKSYDKLVNDPNLGFTTYDSSASNHKLSFSSYGNETNSGSESFNSYGKHVRSGNSDFTNYAVSSNILQSSFTGYGELGTGAANDSFTSYSFNGNNPRSTFKTYGAGSISGSDTFVSYRNRANVGDDSFQSYGSKSKSGSASFTNYGQSFNEGNDTFTEYGKGSTGKTAFGFKIYGLGRAFKGYNKNGVSFSSYNNFSLSSGKIVNKFVEPGKFFRESMLKEGNAMVMPDIRDKMPKRSFLPLSISSKLPFSSLVLEDIKKTFHAREGSATERVITNALGECERAPSVGETKRCVGSAEAMIDFAVSVMGPNVVVKTTENVNGSKKSVMIGKVYGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEAEILDVETKLKINHGVAICHMDTSAWGPQHGAFTALGSEPGKIEVCHWIFENDMTWTIAS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02047 634 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 28 633 - -
Vifa2g02047 634 Pfam BURP domain 419 631 IPR004873 -
Vifa2g02047 634 SMART BURP_2 417 633 IPR004873 -
Vifa2g02047 634 ProSiteProfiles BURP domain profile. 419 633 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02047 Vifa-Chr2 532340747 532342797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02047 - - lja:Lj1g3v0411530.1 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01805 4 511844099 511846114 Vifa2g02047 2 532340747 532342797 ECH
Vifa2g02047 2 532340747 532342797 Vifa2g02047 2 532340747 532342797 ECH