Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01847 ATGAGTGAGGATCTGAAGAAAACTGGTTCTGTTGGCCATGAGAAAATGTCACAAGAGCAACATGCAAAGATCATTGAGGTGAGAGAGATGATAGGAACATTATCAGAAAAGGAAACTGTGTATTGTACTGATGCATCCATTTCGAGGTATTTAAAATCACAGAATTGGAATGTCAAGAAAGCGTCTCAAATGTTGAAGCAGAGCCTGAAATGGAGACGGGAGTACAAACCCGAAGAGATTCGCTGGGATGATGTTTCTAATGAAGCAAAGATTGGGAAAATGTATAGAGCGAATTATTGTGACAAGCATGGAAGACCGGTGATTATAATGAGAACCGATCGCCAGAATTCGAAGTCGTTAACAGAAGAGATTAAGCATTTTGTTTACTGCATGGAGAATGCAGTTTTGAATCTACCACCTCTTCAAGAACAGCGCCTCGGATTGGCAATCATGTATGATGCACCAGGGATTTTCCAACCGTTCTTCGCGATGGTGAAGGTTCTACTTGAGTCTGAGAGTTATAAAAAAGTAAAGTTTGTTTATCCTAACGACCAAAACACAAAGAAGATTATGGAGAGTTTGTTCGATATGGATCAACTTGAACCTGCATTTGGTGGGAACGACGACACAGAATTCGATATGAATAAATATGCTAAGAGAATGAAAGAGGAAGATAACAAGATGCACTCCTTTTGGACCTCACACAATGTTCCTTCTTCTGATTCAACAGGGTCAGAAGCAGATTCTGATACTTCCAACAATGAGAAAACACTTGGTTCCTCACTTCCTAACCCTGAGAAATCACTTGAAGTATGA 816 0.3995 MSEDLKKTGSVGHEKMSQEQHAKIIEVREMIGTLSEKETVYCTDASISRYLKSQNWNVKKASQMLKQSLKWRREYKPEEIRWDDVSNEAKIGKMYRANYCDKHGRPVIIMRTDRQNSKSLTEEIKHFVYCMENAVLNLPPLQEQRLGLAIMYDAPGIFQPFFAMVKVLLESESYKKVKFVYPNDQNTKKIMESLFDMDQLEPAFGGNDDTEFDMNKYAKRMKEEDNKMHSFWTSHNVPSSDSTGSEADSDTSNNEKTLGSSLPNPEKSLEV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01847 271 SUPERFAMILY CRAL/TRIO domain 82 227 IPR036865 -
Vifa2g01847 271 CDD SEC14 90 207 IPR001251 -
Vifa2g01847 271 MobiDBLite consensus disorder prediction 230 271 - -
Vifa2g01847 271 MobiDBLite consensus disorder prediction 231 264 - -
Vifa2g01847 271 SUPERFAMILY CRAL/TRIO N-terminal domain 15 84 IPR036273 -
Vifa2g01847 271 Pfam CRAL/TRIO domain 97 153 IPR001251 -
Vifa2g01847 271 Gene3D - 145 256 IPR036865 -
Vifa2g01847 271 Gene3D - 2 144 IPR036865 -
Vifa2g01847 271 SMART sec14_4 88 209 IPR001251 -
Vifa2g01847 271 PANTHER GH16843P 14 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01847 Vifa-Chr2 479376586 479377869 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01847 K26544 - gmx:100777106 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00404 1 64415842 64419441 Vifa2g01847 2 479376586 479377869 PCT