Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01726 ATGCCTTCTTCTCTTCAGCTTGAGAGATTCAATCCTACAACAGATGCAACCGCTTCAGCAGCCATCGCCAACGGTGTAAACTGTCCTAAACAACCACAAACGCCACCACCCGCGGCAGCGCGTCGTCTTCACCACGCGCATATGGTGGGACCCAACCAGTGTTGCTCCGTCGTGACTCAAAACATCGACGCACCCGTCTCCGCCGTGTGGCCGGTGGTTCGACGCTTCGACAATCCGCAAGGATACAAGAACTTTGTTAAAAGTTGCCACGTCATTACCGGAGACGGCATTAACGTCGGTGCAGTCCGTGAAGTTCGCGTGGTTTCCGGGCTTCCAGCCGAGTCGAGTACAGAGCGGTTGGAGATTCTCGACGATGAGCGGCACGTCATCAGCTTTAGCGTTGTCGGTGGGGATCACCGTCTGAGAAACTATCGGTCGGTGACGACGCTTCATTCTGTAGACGGAAACAGGACACTTGTCATTGAGTCATACGTCGTTGATGTACCGCAAGGTAATACGAAGGAGGAAACGTGTGTTTTTGTTGACACAATCGTACGTTGTAATTTACAGTCGTTGGGTCAGATCGCTGAGAACAGGATCAGAAACAATGTTTAA 615 0.5187 MPSSLQLERFNPTTDATASAAIANGVNCPKQPQTPPPAAARRLHHAHMVGPNQCCSVVTQNIDAPVSAVWPVVRRFDNPQGYKNFVKSCHVITGDGINVGAVREVRVVSGLPAESSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHSVDGNRTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLGQIAENRIRNNV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01726 204 CDD PYR_PYL_RCAR_like 54 197 - -
Vifa2g01726 204 PANTHER - 53 196 - -
Vifa2g01726 204 SUPERFAMILY Bet v1-like 53 195 - -
Vifa2g01726 204 Gene3D - 20 204 IPR023393 -
Vifa2g01726 204 Pfam Polyketide cyclase / dehydrase and lipid transport 54 194 IPR019587 -
Vifa2g01726 204 FunFam Abscisic acid receptor PYL4 20 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01726 Vifa-Chr2 445470443 445471057 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01726 K14496 - gmx:121174020 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01726 2 445470443 445471057 Vifa1g02270 1 365174832 365175419 ECH
Vifa2g01726 2 445470443 445471057 Vifa2g01726 2 445470443 445471057 ECH
Vifa2g01726 2 445470443 445471057 Vifa1g02270 1 365174832 365175419 PCT