Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02270 ATGCCTTCACCTGTTCAGTATCAAAGATACAACACTGAAATGGTCACCGTTAATGCCATTGCTAACGGTCCGAAACAAGGTAGTTACGTAACCGTACCAGAAACGGTTACAAACCACCACAACGCGCACGTGGTGGGACCGAACCAGTGCTACTCCGTCGTGATACAACCGATCAACGCCTTGGTTTCAACCGTCTGGTCCGTCGTTCGACGATTCGACAATCCGCAAGGATACAAGAACTTTGTGAAAAGCTGTAACGTGGTCGCCGGCGACGGCATTCGCGTCGGCGCTTTACGTGAGGTTCGGCTGGTTTCTGGTCTTCCGGCGGTTTCGAGCACCGAGAGGCTTGATATACTTGATGAAGAACGGCATGTTATCAGTTTCAGTGTTGTCGGTGGAATTCATAGGCTGAGGAATTACCGGTCGGTGACGACGCTGCACGGCGACGGGAATGGAGGGACGGTGGTTATTGAATCGTATGTGGTTGATGTACCGCATGGGAACACGAAGGAAGAGACGTGTAGTTTTGTTGATACGATTGTACGATGTAATTTGCAGTCGTTGGCTCAGATCGCAGAGAAACTCTGA 588 0.5051 MPSPVQYQRYNTEMVTVNAIANGPKQGSYVTVPETVTNHHNAHVVGPNQCYSVVIQPINALVSTVWSVVRRFDNPQGYKNFVKSCNVVAGDGIRVGALREVRLVSGLPAVSSTERLDILDEERHVISFSVVGGIHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPHGNTKEETCSFVDTIVRCNLQSLAQIAEKL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02270 195 CDD PYR_PYL_RCAR_like 50 193 - -
Vifa1g02270 195 Gene3D - 8 195 IPR023393 -
Vifa1g02270 195 Pfam Polyketide cyclase / dehydrase and lipid transport 57 193 IPR019587 -
Vifa1g02270 195 SUPERFAMILY Bet v1-like 51 192 - -
Vifa1g02270 195 PANTHER - 61 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02270 Vifa-Chr1 365174832 365175419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02270 K14496 - gmx:100798803 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01726 2 445470443 445471057 Vifa1g02270 1 365174832 365175419 ECH
Vifa1g02270 1 365174832 365175419 Vifa1g02270 1 365174832 365175419 ECH
Vifa2g01726 2 445470443 445471057 Vifa1g02270 1 365174832 365175419 PCT