Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01674 ATGTCCACATTTATTCCAACTCCATCGTGCCCACAGCTGACACCACCAGCGGTAAGATTCATGGGTAGGTTATTTCTCATCAATTTGGAGGGTAGGATCTATACCTGCAAATTCTGTCACACTCATCTTGCTTCGTACGAAGACATCCTTTCCAAGACTTTTCACTGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCTCCTGGCGAAACAGAGGAGAGGCACATGATGACTGGGTTACATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCGATTGTGGGTTGGAGATATGAAACTGCCCATGAAAAAGATCAGAAGTACAAGGAAGGAAAATCTGTGCTTGAACGGTACAAGGTGTCGGGTCCTGATGGTAGCAATTATCGAATCAACAATGGAGCACATATTGGCGGAAGCGATGCAGATGATATATAG 450 0.4422 MSTFIPTPSCPQLTPPAVRFMGRLFLINLEGRIYTCKFCHTHLASYEDILSKTFHCRHGKAYLFNKVVNVSPGETEERHMMTGLHTVADIFCVGCGSIVGWRYETAHEKDQKYKEGKSVLERYKVSGPDGSNYRINNGAHIGGSDADDI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01674 149 ProSiteProfiles Yippee domain profile. 32 129 IPR034751 -
Vifa2g01674 149 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 21 126 IPR039058 -
Vifa2g01674 149 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 34 126 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01674 Vifa-Chr2 436725864 436729058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01674 - - gmx:100305552 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01674 2 436725864 436729058 Vifa2g01674 2 436725864 436729058 ECH
Vifa2g01674 2 436725864 436729058 Vifa1g02151 1 344124562 344126183 ECH
Vifa2g01674 2 436725864 436729058 Vifa1g02151 1 344124562 344126183 PCT