Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02151 ATGGGGAGGTTGTTTGTTGTTCATCTTGAAGGGAGGATCTATAGCTGTAAACACTGTAGAACTCATCTTGCTGTTTCTGAAGATATAGTTTCAAAGGCTTTCCACTCCAGACATGGGAAAGCTTATCTCTTTCGTAAGGTCGCGAATGTTTCTGTTGGGGAAAAAGAGGACAGACCTATGATTACTGGGATGCATACCGTGGCTGACATTTTCTGTGTTGGTTGTGGATCAGTTGTCGGTTGGACTTATATCACTGCTCATGAAAAAAGCCAGAAATACAAAGAAGGAAAATCCGTTATCGAACGGTTCAAAGTATTAGGTCCTGATGGAAGTAATTATTGGGGCAGCCATGAAGCACATGGTGGAAGTGATGCAGATGATGCTTAA 387 0.4212 MGRLFVVHLEGRIYSCKHCRTHLAVSEDIVSKAFHSRHGKAYLFRKVANVSVGEKEDRPMITGMHTVADIFCVGCGSVVGWTYITAHEKSQKYKEGKSVIERFKVLGPDGSNYWGSHEAHGGSDADDA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02151 128 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 102 IPR004910 -
Vifa1g02151 128 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 105 IPR039058 -
Vifa1g02151 128 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02151 Vifa-Chr1 344124562 344126183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02151 - - zju:107413855 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01674 2 436725864 436729058 Vifa1g02151 1 344124562 344126183 ECH
Vifa1g02151 1 344124562 344126183 Vifa1g02151 1 344124562 344126183 ECH
Vifa2g01674 2 436725864 436729058 Vifa1g02151 1 344124562 344126183 PCT