Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01665 ATGGTCGATTTACACCGGAAATTAAACATGCCTTCAAAATCTCCAAAACTCTCTATCTCCGACAAATCCTCACCACGCAACAACTCCCTACCCTTGTTGCAACCACCTTCAATCACAAATGATATCTCGGCCGCGGCAGCTCCTCTTTGCGCGGCTTATGAATACTATCTCCGCCTCCCGGACCTCCGCAAGCTTTGGGAATCAAGAGAATTCCCAAACTGGAGCAACGAACCAATCCTAAAACCAGCTTTACAAGCTCTCGAAATCACCTTTCGTTTCATTTCTACTGTTCTCTCCGACCCCAGACCCTACACGAATCGTTCAGAATGGAACCGGAGACTCGAATCCATCGCCACCAAACAGATTGAGATTATTGCCATGATCTGTGAAGACGAGGAACAAAATCCAGAAACACGTGGAACAGTACCAACCGCTTATCTCAGCAGCGGCGATAGCAAAATCAGAAGCTACAGTGAGACGAGTCTTCTTCCACGGCTTGCCACGTGGTACAAATCCAAGGACGTGGCGCAGAGGATTCTTCTCTCCTTGGAGTGTCAAATGCTGAGATGTTCTTATACGCTAGGTTTGGGTGAACCGAACCTCGCTGGAAAACCGAGCCTCAGGTACGACACCGTTTGCAAGCCGAACGAAGTTCACGCGCTGAAAACGACGCCGTATGACGATCGTATTGACAACTATGAGAATCACGCGGTGCATGCGACTCATCAGATTGTTGAGTCGTGGATCCACGCGTCAAGGAAGCTTCTAGAAAGAATCAGCGACTCGATTGAAGGGAGAAGGTTGGAGAGAGCGGCTGAGGATTGTTATACGGTGGAGAGAATCTGGAAACTTCTTGCGGAGGTTGAAGATATTCATCTCATGATGGATCCAGCTGATTTCTTGAAGCTGAAGAATCAGTTATCGGTGAAATCTTCATCCTACGAAACGGCGGCGTTTTGCATGCGGTCGAAGGAGTTGGTAAAGGTGACAAAGATGTGTAGAGATTTGCGGCATAGAGTGCCGGAGGTACTGGAAGTGGAGGTTGATCCCAAAGGCGGACCGAGGATTCAAGAGGCGGCGATGAAGCTGTATGTGGCGGAGAAGATGAGTGGGTTCGACAAGGTTCACTTGTTGCAGGCTATGCAAGCTATAGAAGTTTCTATGAAGAGATTCTTCTATGGTTACAAACAGGTGCTGACGGTGGTGATGGGGAGTTCTGAGGCTAATGGAAACCGAGTTGGGTTGAGTTGTGATGGCGGTGACTCGTTGACTCATATGTTTCTTGAACCCACGTATTTTCCAAGTTTGGATGCTGCCAAGACTTTTCTTGGATACTTTTGGGATAATGATAACAAATGGGTGTGCGATAATTAA 1374 0.4782 MVDLHRKLNMPSKSPKLSISDKSSPRNNSLPLLQPPSITNDISAAAAPLCAAYEYYLRLPDLRKLWESREFPNWSNEPILKPALQALEITFRFISTVLSDPRPYTNRSEWNRRLESIATKQIEIIAMICEDEEQNPETRGTVPTAYLSSGDSKIRSYSETSLLPRLATWYKSKDVAQRILLSLECQMLRCSYTLGLGEPNLAGKPSLRYDTVCKPNEVHALKTTPYDDRIDNYENHAVHATHQIVESWIHASRKLLERISDSIEGRRLERAAEDCYTVERIWKLLAEVEDIHLMMDPADFLKLKNQLSVKSSSYETAAFCMRSKELVKVTKMCRDLRHRVPEVLEVEVDPKGGPRIQEAAMKLYVAEKMSGFDKVHLLQAMQAIEVSMKRFFYGYKQVLTVVMGSSEANGNRVGLSCDGGDSLTHMFLEPTYFPSLDAAKTFLGYFWDNDNKWVCDN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01665 457 Gene3D - 207 442 - -
Vifa2g01665 457 Pfam Hs1pro-1 protein C-terminus 187 449 IPR009743 -
Vifa2g01665 457 MobiDBLite consensus disorder prediction 13 34 - -
Vifa2g01665 457 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 452 IPR038759 -
Vifa2g01665 457 MobiDBLite consensus disorder prediction 1 34 - -
Vifa2g01665 457 Pfam Hs1pro-1 N-terminus 1 184 IPR009869 GO:0006952
Vifa2g01665 457 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 209 443 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01665 Vifa-Chr2 435839952 435841325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01665 - - psat:127083938 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01665 2 435839952 435841325 Vifa2g01665 2 435839952 435841325 ECH
Vifa2g01665 2 435839952 435841325 Vifa1g02105 1 336005588 336006910 PCT