Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02105 ATGGTTGATTTAGAATGGAAATCAAACATGCTAAACTCAAACCTATCACCTAAATCCCCCAAACTCTCCTTACCCACTTTACATCTCCCTCTTCCACTCTCCCCAAACGATATCTCAACCGCGTCTTCCACCGCTTGCGCCGCGTACGACAACTATCTCCGCCTCCCTCACTTCAGAAGCCTCTGGGCTTCATCCAACTTCCCAAACTGGACCAACGAACCTGTCGTAAAGCCCGCCTTACACGCACTCGAAATCACTTTCCGTTTCATTCTAACCGTTTTATCAGACCCAAGACCCTACATCAACAAACGCGAGTGGACTCGACGCGTCGAAACACTCGCCAAAACACAAATCCATCTCATCGCAATACTATGCGAACAAGAGGAACAAAACCCAGACACACGTGGCAAAGCACCGGTAAGTGACATCAGCAATACAGACCAAAACAAATCCAGAACCTACAGTGACGAAAGCTTGCTTCCAAAACTCGCCACGTGGCAGAAATCGAAACAAATCGCACAGAGAATTCTCTCCACCGTGGAATCCGAAATGATGACGTGTCCTTACACGTTAGGTTTAGGAGAACCAAACATTAACGGAAAACCGATTCTCCGTTACGACGACGTTTGTAAACCGAATTTCATACACTCGTTAGAAACAACGCCGTTTGATCATATCCAGAACCACGAGAATAGAACATTACACGCTACGCACCAGATTTTCGAGTCATTGACACGCTCGGCGCGTGTGTTATTAGAGAGAGTGAGTGGATCCATTGATAACAAAAGATTCGAGAATGCAGCGAGTGAGATCTACGCGGTGGAAAGGATTTGGGAAACCCTAACGGTGGTAGAAGATTTACATCTAATGATGGATCCGGTGGATTTTCTGAAACTGAAAAAGCAATTAGGGATGAAAACGATAACAATGAATGAAACGGTGCCGTTTTGTTTCCGGTCGACGGAGCTGGTGGAGATGACGAAGATGTGTAGAGATCTGAATCGGAAAGTGCCGGAGATTTTGGAGGTTGAGGTGGACCCGAGGGGTGGACCCGGAGTGATGGAAGAAGCGATGAAGGTGTATTCGGAGAAGAGTGGGTTCGAGAAGGTTCATGTGTTGCAAGCGATGCAGGGGTTAGAGACGGCGATTAAGAGGTTTTTTTATGCGTATAAACAAGTTTTGACGGTGGTGATGGGAAGTGGTGAGTTGAATTTGGAGTTGCTGAGTCAGATATTTCTTGAACCTACTTGTTTTCCTAGCTTGGATGCTGCTAAGACTTTTCTTGGGTATTATTGGGAAAATAGTGAAAGTATTAGTTGGTAA 1323 0.458 MVDLEWKSNMLNSNLSPKSPKLSLPTLHLPLPLSPNDISTASSTACAAYDNYLRLPHFRSLWASSNFPNWTNEPVVKPALHALEITFRFILTVLSDPRPYINKREWTRRVETLAKTQIHLIAILCEQEEQNPDTRGKAPVSDISNTDQNKSRTYSDESLLPKLATWQKSKQIAQRILSTVESEMMTCPYTLGLGEPNINGKPILRYDDVCKPNFIHSLETTPFDHIQNHENRTLHATHQIFESLTRSARVLLERVSGSIDNKRFENAASEIYAVERIWETLTVVEDLHLMMDPVDFLKLKKQLGMKTITMNETVPFCFRSTELVEMTKMCRDLNRKVPEILEVEVDPRGGPGVMEEAMKVYSEKSGFEKVHVLQAMQGLETAIKRFFYAYKQVLTVVMGSGELNLELLSQIFLEPTCFPSLDAAKTFLGYYWENSESISW 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02105 440 Pfam Hs1pro-1 protein C-terminus 184 434 IPR009743 -
Vifa1g02105 440 MobiDBLite consensus disorder prediction 137 155 - -
Vifa1g02105 440 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 206 428 IPR037217 GO:0019441|GO:0020037|GO:0046872
Vifa1g02105 440 MobiDBLite consensus disorder prediction 131 155 - -
Vifa1g02105 440 Gene3D - 204 307 - -
Vifa1g02105 440 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 437 IPR038759 -
Vifa1g02105 440 Pfam Hs1pro-1 N-terminus 1 181 IPR009869 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02105 Vifa-Chr1 336005588 336006910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02105 - - gmx:100778560 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02105 1 336005588 336006910 Vifa1g02105 1 336005588 336006910 ECH
Vifa2g01665 2 435839952 435841325 Vifa1g02105 1 336005588 336006910 PCT