Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01625 ATGGGAATAGGAGGCGGTGAGACTAGTGATCCAAACAAGGTTCATGATGATTCTGTCGAAGTTCCAGATACTGCACATCAAATTAGCAGCGATTCATGGCTTCAAGTGGCATTTGTGTTGACCAATGGAGTCAACAGTGCTTTTGTCCTCGGATATTCCGGGACTGTCATGGTTCCCCTGGGTTGGGTAGGGGGTGTAGTTGGTCTCATTCTTGCTGCGTTGGTATCACTTTATGCTAATGCTCTTATTGCTAATATCCATGAGTTAGGAGGGACAAGACACATTAGATACAGAGATCTTGCTGGATATGTATACGGTAAAAAGGCCTATAAACTCACATGGGCTCTCCAGTATATCAATCTTTTTATGATCAATACTGGTTTCATTATTTTGGCTGGTTCAGCCTTGAAAGCAACTTATACCTTGTTTAGGGATGATGCTCAGCTGAAGCTTCCTTATTGTATTGCTATAGCTGGATTTGTGTGTGTGTTGTTTGCCATTAGTATTCCTCATCTTTCAGCTCTTGGAATTTGGTTGGCAGTTTCAACCGTCTTCGGCGTGATATACATTGCTATAGCGTCTGTGCTATCAATTAAAGATGGAATACAGTCACCACCTCGAGATTACACCATTCCAGGAGAAGGGGCAAGTAAAGTATTTGAAACGATCGGGGCGTCTGCTAACCTTGTGTTCGCATATAACACCGGCATGCTTCCAGAGATACAGGCAACAATTAAGCAGCCAGTGATCAAGAACATGATGAAATCCCTTTACTTTCAGTTTACCGTCGGAGTTATACCATTGTACCTTATAACCTTTTCAGGATATTGGGCCTATGGATCTTCCACAGAAACCTATTTACTGAATAGTACAAAGGGTCCAGTCTGGGTGAAAGCTGTCGCCAATATTTCAGCCTTCCTTCAATCAGTCATCGCACTGCATATATTTGCAAGTCCAATGTATGAGTATCTGGATACTAAAAACGGGATCAAAGGAAGCGCAATGAATATTAAGAACTTGTCCTATAGAATTACAGTAAGAGGCGGATACCTGGTATTCAACACATTCGTGGCAGCTCTCCTACCTTTTCTTGGAGATTTCATGAGCCTCACGGGAGCGATCAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACATGGTGGCAAAGAAGAACAAATTAGCAATTTTACAGAAGCTCTGGCACTGGATCAACATTGTTTTCTTTAGCATCATGTCTATTGCAGCATCTGTTGCAGCACTACGGCTTATTTCTGTAGACTCCAAAACATACCATCTCTTTGCGGATATTTGA 1320 0.4197 MGIGGGETSDPNKVHDDSVEVPDTAHQISSDSWLQVAFVLTNGVNSAFVLGYSGTVMVPLGWVGGVVGLILAALVSLYANALIANIHELGGTRHIRYRDLAGYVYGKKAYKLTWALQYINLFMINTGFIILAGSALKATYTLFRDDAQLKLPYCIAIAGFVCVLFAISIPHLSALGIWLAVSTVFGVIYIAIASVLSIKDGIQSPPRDYTIPGEGASKVFETIGASANLVFAYNTGMLPEIQATIKQPVIKNMMKSLYFQFTVGVIPLYLITFSGYWAYGSSTETYLLNSTKGPVWVKAVANISAFLQSVIALHIFASPMYEYLDTKNGIKGSAMNIKNLSYRITVRGGYLVFNTFVAALLPFLGDFMSLTGAISTFPLTFILANHMYMVAKKNKLAILQKLWHWINIVFFSIMSIAASVAALRLISVDSKTYHLFADI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01625 439 Pfam Transmembrane amino acid transporter protein 31 423 IPR013057 -
Vifa2g01625 439 PANTHER OS05G0424000 PROTEIN-RELATED 28 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01625 Vifa-Chr2 432972747 432975258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01625 57 439 Organic Solute Cotransporters AT3G55740 71.802 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01625 K26247 - gmx:100778997 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01625 2 432972747 432975258 Vifa2g01625 2 432972747 432975258 ECH
Vifa2g01625 2 432972747 432975258 Vifa1g02055 1 327136817 327139080 PCT