Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02055 ATGGTTCCTTTGGGTTGGATTGGTGGTGTTGTTGGTTTGATTCTTGCTACTCTAATATCTCTTTATGCAAATTCTCTTATTGCTATGCTTCATGAATTTGGTGGAACAAGACATATTCGATACCGTGATCTTGCTGGATTTATATATGGTAAAAAAATATATTCCCTCACATGGACTTTGCAGTATGTCAATCTTTTCATGATAAATACTGGCTACATCATTTTGGCGGGTTCAGCTTTGAAGGCTGTTTATGTGCTATTTAGGGATGATGATCATATGAAGCTTCCACATTTTATTGCCATAGCTGGACTTGTGTGTGCAATGTTTGCCATTTGTATTCCTCATCTTTCGGCTCTTGGAATTTGGCTCGGATTTTCAACCATCTTGAGCCTCACATACATTGTCATATCGCTTGTACTGTCACTAAAAGATGGAATAAAATCTCCAGCTCGCGATTATAGTATTCCGGGGACATCAACTAGTAAAATATTTACAACAATTGGAGCGTCTGCGAATCTTGTGTTCGCATATAACACAGGAATGCTTCCTGAGATACAGGCGACGATCAGACAGCCGGTTGTCAAGAACATGAAGAAAGCCCTATACTTTCAGTTTACCGCCGGAGTTCTACCATTATATTTGGTTACATTCGCAGGTTACTGGGCTTATGGATCTTCAACAGAAACCTATTTGTTGAATAGTGTCAATGGTCCAATCTGGGTGAAGGCTTTGGCCAATATTGCAGCATTTCTTCAATCAGTCATTGCATTGCATATATTTGCGAGTCCGATGTATGAGTATTTGGATACCAAACATGGAATCAAAGGAAGTGCTCTGGCTTTTAAAAATTTGTCATTTCGAGTTTTGGTTAGAGGTGGCTACATGGCTCTGAACACATTTGTATCTGCTCTTTTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCTCTTACATTTATCCTTGCACACCATATGTACCTAATGGCAAATAAGAACAAACTAAAATCTACTCAAAAGTTATGGCATTGGCTCAACATTTGGTTCTTTGCCGTTATGTCTGTTGCAGCAACTATTGCAGCACTGCGGCTTATTGCTCTAGACTCCAAAACTTATCATGTTTTTGCTGATTTATGA 1152 0.3924 MVPLGWIGGVVGLILATLISLYANSLIAMLHEFGGTRHIRYRDLAGFIYGKKIYSLTWTLQYVNLFMINTGYIILAGSALKAVYVLFRDDDHMKLPHFIAIAGLVCAMFAICIPHLSALGIWLGFSTILSLTYIVISLVLSLKDGIKSPARDYSIPGTSTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMKKALYFQFTAGVLPLYLVTFAGYWAYGSSTETYLLNSVNGPIWVKALANIAAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRVLVRGGYMALNTFVSALLPFLGDFMSLTGAISTFPLTFILAHHMYLMANKNKLKSTQKLWHWLNIWFFAVMSVAATIAALRLIALDSKTYHVFADL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02055 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 365 - -
Vifa1g02055 383 Pfam Transmembrane amino acid transporter protein 1 365 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02055 Vifa-Chr1 327136817 327139080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02055 1 383 Organic Solute Cotransporters AT2G39890 78.329 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02055 K26247 - gmx:100500168 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02055 1 327136817 327139080 Vifa1g02055 1 327136817 327139080 ECH
Vifa2g01625 2 432972747 432975258 Vifa1g02055 1 327136817 327139080 PCT