Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01614 ATGGAAACTTTATCTACAAACAGTGAAGATTCTCACAAGAAAAAAGATGGGTCTTTTTGTTGTGTCACTGATTCAAGTGCTGAGTCTAGAAAAACAAGTTTCAGTGGATCTAGTTCTACTTCCACCTCTTCAGTTTCCACTTCAGATGAAGCTAAACCAAAAGGGTTTTCTTCTCCTGCTCCTCCTCTTGGTTGGCCTATTCTCAAAGCTACACTTTCCAATTCAAAGCGTTCGAATTCTGATGAAAAACATAAGCCTAACTTGGAGTTGGATCACAGGAAATTTACCTCTATTGATTTGAAAATTCCAGATGTTGATATGATGAAGGAGAGATTTGCGAAGTTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCTATCTCTAATGCCATTACTAATCTTTGTGCTACTGCATTTGGGCAACTATGGAGACTAGAACCACTGCCTTGTGAGAAGAAAGAAATGTGGAAAAGAGAGATGGAATGGTTTGTTAGCATTAGTGATCATATTGTTGAATTGATACCTTCTTGGCAAACATTTCCGGATGGAAAGAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTGTATCAATGTTCCAGCCCTTCGCAAACTCGATAACATGCTACTCGAAATATTAGACAGTTTTACAGCTACGGAATTTTGGTATGTTGATCAAGGAATTGTAGCCGCTGATGCAGATGGTTCAGACTCATTTCGTAAGTCAATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCTGTACCTCGTGTCCCGCCTGCAGGTCTCAGTGAGAACTCAAGAAAGAAGTTGAATCACTCTAGAGAAAGTGCGAGTCAAATTCTCAAAGCAGCCATGTCTATCAACAGCATTGCATTGGCCGAAATGGAAGTTCCCGAGTCATATTTGGAAACCCTCCCTAAGAATGGAAGAGCTTGCCTCGGAGATTTTATTTACCGATACATCACATCAGATCAATTCTCTTCCGAGTGCCTACTTGATTGCTTAGATATATCTTCTGAACATATTGCACTTGAGATTGCCAACCGCGTTGAAGCTGCATTTTATGTTTGGCGTCGAAGAGCTCACCACAAATCAACGCCTATTCCAAACCGTTCAACTACGAAGTCATCATGGGGGATAGTCAAGGACTTCATGCATGATGGAGATAAGAGAGATTTGCTAGCTAATAGAGCTGAAAACATTCTAAATTCCTTGAAGCATCGGTTCCCGGGATTAACACAAACAACCTTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTTTAGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTTTAACATTGTATCACGCATCGATGATTTGCTATACGTGGATGACTTGACAAAACATTCTGATACATTTGCATTGATTCCTCATCAAAAGATTAATCATCCATTTTCAGTGTCTGTCTCCGGCACTCCACACAAATCAGCATTCGGTACACCTAAATTTTCACCAATGCCATTGATTAGTCCTTCAAAAGGGGAGAGAACTCCTTTCCTCCACAACAATAACAACAACAACAATGTCAACAACATCAAACCTCAACGTCGCGGATTTGGGGTGAGAAGAGTGTTGTCAAATTATCTTGGCGTTGAAACAAAAACAAAGACATGTACCAATTCAACAGAGGTTAATTGTTCAAACCCAAGTAGCAAGAAAACAGAACAACCTCATAAGGAAACATGCGCCCTGAAAAACCAGACAAAATGA 1779 0.407 METLSTNSEDSHKKKDGSFCCVTDSSAESRKTSFSGSSSTSTSSVSTSDEAKPKGFSSPAPPLGWPILKATLSNSKRSNSDEKHKPNLELDHRKFTSIDLKIPDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWKREMEWFVSISDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINVPALRKLDNMLLEILDSFTATEFWYVDQGIVAADADGSDSFRKSIQRQEEKWWLPVPRVPPAGLSENSRKKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRACLGDFIYRYITSDQFSSECLLDCLDISSEHIALEIANRVEAAFYVWRRRAHHKSTPIPNRSTTKSSWGIVKDFMHDGDKRDLLANRAENILNSLKHRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLLYVDDLTKHSDTFALIPHQKINHPFSVSVSGTPHKSAFGTPKFSPMPLISPSKGERTPFLHNNNNNNNVNNIKPQRRGFGVRRVLSNYLGVETKTKTCTNSTEVNCSNPSSKKTEQPHKETCALKNQTK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01614 592 FunFam Rop guanine nucleotide exchange factor 7 305 433 - -
Vifa2g01614 592 Gene3D PRONE domain, subdomain 1 337 477 - -
Vifa2g01614 592 Gene3D PRONE domain, subdomain 1 99 336 - -
Vifa2g01614 592 MobiDBLite consensus disorder prediction 1 63 - -
Vifa2g01614 592 FunFam Rop guanine nucleotide exchange factor 14 337 476 - -
Vifa2g01614 592 MobiDBLite consensus disorder prediction 563 592 - -
Vifa2g01614 592 ProSiteProfiles PRONE domain profile. 95 477 IPR005512 GO:0005085
Vifa2g01614 592 MobiDBLite consensus disorder prediction 22 53 - -
Vifa2g01614 592 FunFam Rop guanine nucleotide exchange factor 1 96 336 - -
Vifa2g01614 592 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 15 524 IPR038937 GO:0005085
Vifa2g01614 592 MobiDBLite consensus disorder prediction 1 19 - -
Vifa2g01614 592 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 104 471 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01614 Vifa-Chr2 429625475 429627877 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01614 - - gmx:100796692 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01614 2 429625475 429627877 Vifa2g01614 2 429625475 429627877 ECH
Vifa2g01614 2 429625475 429627877 Vifa1g02009 1 320997990 321001266 ECH
Vifa2g01614 2 429625475 429627877 Vifa1g02009 1 320997990 321001266 PCT