Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01143 ATGGTTATGCAAAACTCTCTACAAATAACAACAAATGCTTCTGCTGCTTATGATGATGATGGACGTCCCAAAAGAACAGGAAATCTGAAAAGTGCTGTGGCTCATATCATCACTGCTGTTATTGGCTCTGGTGTTTTGTCTTTGGCTTGGAGTATTTCTCAATTAGGATGGATTGGAGGACCAATTGCCTTGCTATCTTGTGCAACAGCTACCTATATTTCTTCAAACATTTTGTCTGATTGTTACAGAACTCCTGACCCTGTAACCGGAAAAAGAAACTACTCTTACATCGATGCTGTTAGAGTCAATCTTGGTACGAAAAGGACATACGTGGCTGGTTTCCTTCAACTCTTGAGCTTGTATGTGACTAGTGTTGCCTATGTAATTACCACAGCAACCAGTTTGAGGGCTATTATGAGATCAAATTGTTATCACAAAGAAGGACACCAAGCTCCTTGTAGTTATGGTGGTAATTTATATATGGTGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCGGATCTCCATAACATGACTTGGCTTTCAGTTATTGCCGCAATAATGTCATTTTCATACTCCTTTATTGGACTAGGACTTGGCATATCAACAGTCATAAAAAACGGAAGAATTATGGGAAGTTTAACAGGAGTACAAACTGCTAATGTTGCCGGAAAAATCTGGTTAATCTTCCAAGCAATTGGTGACATTAGCTTTTCCTATCCATACCCAATGCTCCTTCTTGAGATACAGGACACTCTAGAGTCTCCTCCATCAGAGAATAAAACCATGAAAAAGGCTTCCGTGATTTCAATCGCCATTACAACATTCTTCTACCTATGTTGTGGATGCTTTGGATATGCGGCTTTTGGAGATGCTGCACCAGGAAATTTATTGACAGGGTTTGGATTTTATGAGCCTTTCTGGCTTATTGACATTGCCAATGTTTGTATTATCATTCATTTGGTTGGAGGATATCAGATATTCAGTCAACCAATATACAGTGCTGCTGATAGATGGTGTTCAAAGAAGTACCCTAACAGTGACTTTGTTAATGATTTCCAGAAAGTGAAACTTCCTCTATTACCGGCTTTTGAGATAAATCTTTTCAGATTTTGTTTTAGAACAACCTATGTGATTTCAACCACTGGACTTGCAATTTTATTCCCTTACTTCAACCAAATTCTGGGAGTATTAGGAGGCATAAATTTCTGGCCATTGGCTATATATTTCCCAGTTGAGATGTACTTCGTACAGATGAAAATTGGAGCTTGGACTAAAAAATGGATTCTTCTAAGAATATTTAGTTTTGCTTGCTTTCTTGTCACAATGATGGGATTTATTGGATCATTTGAAGGAATCATACGTGAGAAACTCAAGTAA 1386 0.3802 MVMQNSLQITTNASAAYDDDGRPKRTGNLKSAVAHIITAVIGSGVLSLAWSISQLGWIGGPIALLSCATATYISSNILSDCYRTPDPVTGKRNYSYIDAVRVNLGTKRTYVAGFLQLLSLYVTSVAYVITTATSLRAIMRSNCYHKEGHQAPCSYGGNLYMVLFGLVQIVMSFIPDLHNMTWLSVIAAIMSFSYSFIGLGLGISTVIKNGRIMGSLTGVQTANVAGKIWLIFQAIGDISFSYPYPMLLLEIQDTLESPPSENKTMKKASVISIAITTFFYLCCGCFGYAAFGDAAPGNLLTGFGFYEPFWLIDIANVCIIIHLVGGYQIFSQPIYSAADRWCSKKYPNSDFVNDFQKVKLPLLPAFEINLFRFCFRTTYVISTTGLAILFPYFNQILGVLGGINFWPLAIYFPVEMYFVQMKIGAWTKKWILLRIFSFACFLVTMMGFIGSFEGIIREKLK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01143 461 PANTHER OS05G0424000 PROTEIN-RELATED 31 451 - -
Vifa2g01143 461 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01143 Vifa-Chr2 305509025 305511015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01143 11 443 Organic Solute Cotransporters AT1G77380 51.954 6.80e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01143 K24917 - gmx:100818535 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03640 1 560735306 560737804 Vifa2g01143 2 305509025 305511015 PCT