Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08909 ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTTTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCATGTTGCTGCTACATTGTTGAGTTTATCATCTTCTTCTTTAAGAACCGCATGTCTCAAATCTCAGCAACAAAATAACCATAACCATAACCATAACCATAACCATAACCATAACCACCCTCTTCATTGTAGAGCTCTTGAACTTTGTTTCAATGTTGCTCTCAACAGGCTTCCAACTATCACTACTACTCATTCTTCTCCTTTGCTTCAACCTCATCAGCATGTTCCTTCTCTTTCTAATGCTCTTATTGCTGCTCTTAAACGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAATCAGCAACAGCCTCTTTTGAGTGTTAAGGTTGAGCTTGATCAGCTTATTCTTAGTATTCTCGATGACCCTTCTGTGAGTAGGGTTATGAGAGAAGCTGGTTTTCAAAGTGTTTCTGTTAAAAATAACTTAACAGAAAGAAGCTCTTCAAACTCTAACCTTTCTGTTTTTCATTCTTCTTCTTCACCTTCTCTTACTCATAATAACCATTTCTCCGGTTCTTATGGTTATGGTTACGGTTATGGTTATGGTTCAGTTCTTTTTTCTCCTCAGAAGAAACCACAAGTGTTTAATAATAATAATAGTAATAATCCTAGAGATGATGTTAATGTTAACCTTGTTTTTGATGTTCTTTTGAGGAAGAAGAAGAGAAACACTGTGATAATCGGCGATACCGTTGCGTTAACCGAAGGACTAGTTGGTGAGTTGATGGAAAGATTTGCGAGAGGTGCAGTTCCTGATGAGATGAAAAAAGCTCATTTTGTGAAGTTTCATAATCTTGCTTCGGTTTCTAGTTTGAAAAGGGAAGAAGCTGAGACGAATGTTGTGAGAGTGTTGAAAAGGAAGGTTAGTGATTGTGTTGCATTAGGTGCTGGTGGAGGTGTTTTCTATGTTGGAGATTTGAAGTGGATAGTGGATTGTGATGATGATGATGATGAGAAGTTAAGTGATTATGTTGTGGATGAAATGGGAAAGTTGTTTGGTGAAAATGGAAACAATATTTGGCTTATTGCAACAGCTAGTTATCAAACATACATGAGATGTCAAATGAGGATACCAAATCTTGAGAATCAATGGTGTCTTCAAGCTCTTCCTGTTCCTTCTGGTGGACTTGGTTTGACTCTTCACTCTTCAAGTGTGCATGATTCAAAAATGAGCATAACTCAAAACCCATCTCTTATGATGGAATCAAAGCTCTTTAGCAACAAGGAGGGACATGATAAGCTTAATTGTTGTGAAGAATGTGCTTCAAGTTATGAAAAAGAAGCTCAATTATTCAAACCACCTCAGAAGAATCTCTTGCCTTCATGGCTTCAGTCTCATAGTACAGAAACTCATCATAAGGATGAATTAACTGAGTTGAAGAAAAAGTGGAACAACATGTGCCAATGTCTCCACCATAACAAACAACCTCAAAACCATTGGAACAACCCTTATAATTCATTAAGTTCAATATCTTTTGCTGATTCTGTAACCAAACCAGCTTATAGCTCAAATATTATACCTCGGTTCCGGCGCCAACAACAATCTTCCACCATTGAGTTCAATTTCAATGATGAAAAATCACAGAAAAACCATATGGCCGCAACAAGCTTGGATTCTCTTAAGGGTAGTATGGAAGATACTAAAGAAGAGAATGTTCCATGGCAATATGAAGCAGTTAGTTCAATAGCAGAAGCATTGGTTGATTCGAAATCGAAGGAATGTGCTACTTGGTTGTTTTTGCAAGGGAATGATTCTATTGGGAAGAAAAGGTTGGCACTTGCAATTGCAGAATCTGTTTGTGGATCAGTTGATATGTTATTTCAATTGGATATGTTGAAGAGAGAGAATTCAGAGACACCCTTTTCTGAAATAGTTGTTGGGCTAATGAGAAACCATGAAAAGTTTGTTGTTTTGGTTGAAAATGCTGATTTTGGTGATACCCTTTTGAGGAAAATGGTTGATGATGAATTTGGGATTGGAAAGTTTGGAACTTTGGGCCAGAAAATATTCATATTGACCAATGGATGCAATATGGTTAGTGAAGATCAGAAGAAGGATTCTGTGATGAAGTTGGTTTTGCAGATAAGTGAAACTGAGAAAAAACCAGCTTTGGAGTTATCATCGTCTTCGTCATCATCGCCTTGTTTGAGTAATAAAAGAAGGGCTGAACTTGATTTGTTCGGCAAGAGTAAGAATCCAAGGATTGAAGAAAATGAAGGGAAGAACAAAAAGATAGAAATTTCATTTTCAAGACAATCGAGTTTCAACAACACTCTTGACTTGAACATGATAGCTGATGAAGAAGATGATAATGATGATGATGATCGTGATCACGAGGGAGAAAATAGTCCGATCTCAAGTGATTTGACAAGAGAAACATTAGGAGAGCATTTGATCTCGAATGGATCACTTGACTCTATTGAGAATTTGTTCGAGTTGAGTCATACTCCGGATAAGAACAAGGAAACGACAAAGATGTTTATGTCTATGGTAAAAAGATCATTCGAGGAGGTTTATGGGAATGTAAAGTTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTTGGGTGTGGGGGGTTTACTAACAACATGTTTGAGAAATGGCTAAAAGAGATTTTTCAAACAAGTTTAGAAAGAGTTAATGGTGGGGGTAAAAATGGTATAGTTTTTACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGAGGGTTTATGGGTTCATGTTTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA 2895 0.3744 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLSSSSLRTACLKSQQQNNHNHNHNHNHNHNHPLHCRALELCFNVALNRLPTITTTHSSPLLQPHQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFQSVSVKNNLTERSSSNSNLSVFHSSSSPSLTHNNHFSGSYGYGYGYGYGSVLFSPQKKPQVFNNNNSNNPRDDVNVNLVFDVLLRKKKRNTVIIGDTVALTEGLVGELMERFARGAVPDEMKKAHFVKFHNLASVSSLKREEAETNVVRVLKRKVSDCVALGAGGGVFYVGDLKWIVDCDDDDDEKLSDYVVDEMGKLFGENGNNIWLIATASYQTYMRCQMRIPNLENQWCLQALPVPSGGLGLTLHSSSVHDSKMSITQNPSLMMESKLFSNKEGHDKLNCCEECASSYEKEAQLFKPPQKNLLPSWLQSHSTETHHKDELTELKKKWNNMCQCLHHNKQPQNHWNNPYNSLSSISFADSVTKPAYSSNIIPRFRRQQQSSTIEFNFNDEKSQKNHMAATSLDSLKGSMEDTKEENVPWQYEAVSSIAEALVDSKSKECATWLFLQGNDSIGKKRLALAIAESVCGSVDMLFQLDMLKRENSETPFSEIVVGLMRNHEKFVVLVENADFGDTLLRKMVDDEFGIGKFGTLGQKIFILTNGCNMVSEDQKKDSVMKLVLQISETEKKPALELSSSSSSSPCLSNKRRAELDLFGKSKNPRIEENEGKNKKIEISFSRQSSFNNTLDLNMIADEEDDNDDDDRDHEGENSPISSDLTRETLGEHLISNGSLDSIENLFELSHTPDKNKETTKMFMSMVKRSFEEVYGNVKFSVQDKVIEEIGVGCGGFTNNMFEKWLKEIFQTSLERVNGGGKNGIVFTLCWGGKEDRKWDRGFMGSCLPKNIQIVNYLMD 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08909 964 Gene3D - 9 188 IPR036628 -
Vifa1g08909 964 MobiDBLite consensus disorder prediction 807 831 - -
Vifa1g08909 964 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 930 - -
Vifa1g08909 964 MobiDBLite consensus disorder prediction 767 786 - -
Vifa1g08909 964 ProSiteProfiles Clp repeat (R) domain profile. 8 189 IPR004176 -
Vifa1g08909 964 MobiDBLite consensus disorder prediction 767 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08909 Vifa-Chr1 1410455935 1410459721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08909 - - cam:101489668 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08909 1 1410455935 1410459721 Vifa1g08909 1 1410455935 1410459721 ECH
Vifa4g04431 4 1399406173 1399409740 Vifa1g08909 1 1410455935 1410459721 PCT