Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05378 ATGAAGTTCCAAGAGAAAGACCATCTCTATGGAAACAACAACAATAAAAAACAAATGATCCCAAAACTAATCTTAACAGCAATCTTTGTCACAATTCTTGTTCTTGTAACCCCTTTATCTTATCCTTTCTTTGGTTCATCATTACTCGTAATGATGAACAAGTCTAAACAACTACCATCATCATCATCATCATTATCCTCTTCTCCAAACATTGAACAAGAAACTTTACCTTCAACATCATTGAAAACTTGTGACATATTTAGTGGTGAATGGGTTCCAAATCCAAAAGCACCATATTACACAAACAAAACATGTTGGGCTATTCATGAACATCAAAATTGTATGAAATATGGAAGGCCAGATTCTGATTTCATGAAGTGGAGATGGAAACCAAATGAGTGTGAATTGCCAATTTTCAATCCTTTTCAGTTTCTTGAAATCGTTAGAGGAAAATCTATGGCTTTTGTTGGAGATTCTGTTGGGAGAAATCACATGCAGTCTTTGATTTGTCTACTATCAAGGGTGGAATGGCCCATTGATGTATCATACACAAAAGATGACTATTTCATGAGATGGAAATATCCAAGTTACAATTTCACCATGGCAGTTTATTGGACACCATTTCTTGTCAAAACAAAACAAGAAAGTTCAGATGGGCCAACACACACTGGTCTCTACAATATTTATCTTGATGAGTTTGATGAAAAATGGACATCAGAAATTGAAGATTTTGACTATGTCATAATCAATGGAGGACATTGGTTTCAGAAGCCAATGGTTTTCTATGAGAAGGGAAAAATTGTTGGATGCCATTATTGTCTCTTAGAAAATGTGACTGATTTAACAATGTATTATGGCTATAGAAAGGCTTTTAGGACAGCATTTAGAGCCCTGAATAGTTTAGAAAATTTTAAGGGTGTGACATTTCTTAGGACATTTGCACCATCTCATTTTGAGAATGGTATATGGAATCAAGGTGGGAATTGTGTGAGGACTAAGCCATTTAAGAGTAACGAGGCTAGGTTAGAGGGGACTAATATGGAGTTATATATGATTCAATTGGAGGAGTATAAAATTTCTCAAAAATGGGCAAAAAGAAATGGTTTGAAAATCAGATTGCTTGATACTACACAATCAATGTTATTGCGACCAGACGGACATCCAAGTAGGTATGGACATTTGCCGGGAGAGAATGTGACATTGTATAATGATTGTGTACATTGGTGTTTGCCAGGACCGATTGATACATGGAATGATTTCTTACTTGAAATGTTGAAGATGGAGATTGTTAAGTCTAAGAGAGAGAGGCGTCAAATATATTCATAA 1326 0.3522 MKFQEKDHLYGNNNNKKQMIPKLILTAIFVTILVLVTPLSYPFFGSSLLVMMNKSKQLPSSSSSLSSSPNIEQETLPSTSLKTCDIFSGEWVPNPKAPYYTNKTCWAIHEHQNCMKYGRPDSDFMKWRWKPNECELPIFNPFQFLEIVRGKSMAFVGDSVGRNHMQSLICLLSRVEWPIDVSYTKDDYFMRWKYPSYNFTMAVYWTPFLVKTKQESSDGPTHTGLYNIYLDEFDEKWTSEIEDFDYVIINGGHWFQKPMVFYEKGKIVGCHYCLLENVTDLTMYYGYRKAFRTAFRALNSLENFKGVTFLRTFAPSHFENGIWNQGGNCVRTKPFKSNEARLEGTNMELYMIQLEEYKISQKWAKRNGLKIRLLDTTQSMLLRPDGHPSRYGHLPGENVTLYNDCVHWCLPGPIDTWNDFLLEMLKMEIVKSKRERRQIYS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05378 441 Pfam PMR5 N terminal Domain 82 135 IPR025846 -
Vifa1g05378 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 46 422 IPR029962 GO:0016413
Vifa1g05378 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 136 424 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05378 Vifa-Chr1 833676134 833679387 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05378 - - gmx:100811842 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00744 1 125070030 125074704 Vifa1g05378 1 833676134 833679387 PCT