Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00744 ATGGCTACCCTTTACTCAACTCACTGTCGTTCATTCCCATCCTCTTCCTCCACCTCTTTCCCTCCTTCTAACCGCTTTCCCGCCGCTACTGTTTCTCTCAAATCTCATCCCCATTTGCTTCATCACCTTTCAGTTCATACCCAACAACATGACGGTGCAGCCACCGTATCCCCGGTTGAAAACAACCATAGTGGTAAGCGACCAAGACCGGAAGTGTTGCCGGTTATTTCCTTGAAGGAGTCTGAAGTGGAGGTTGATTTTGAAAAGGATGAAAGTGAGGTTACTGTTAGTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAGAAGAAGATATTTCCGGCACTATTTGCACTGTACTATGAGGGTTTTCTCCCTAAGCACTTCACTATTTGTGGTTATGCTCGAAGCAAGATGACTGATGTAGAATTGAGAAATATGGTTAGCAAGACTCTTACATGTAGAATTGATCAAAGAGAGAACTGCAATGAAAAGATGGAACAATTTCTTAAAAGATGTTTCTATCATTCGGGTCAATATGATTCTCAGGAAAATTTTGCAGCACTAGACAAGAAGCTGAAGGAACATGAGGGTGGGAGAGCTTCTAATCGCCTGTTTTATCTTTCAATTCCTCCTAATATATTCGTACATGCTGTAAAATGCGCAAGCTTGTCAGCTTCTTCTGGTAATGGTGGCTGGACCAGAGTCATTGTTGAAAAGCCTTTTGGCCGTGATTCAGAATCCTCAGCCGCTTTAACAAGATCTCTCAAGCAATATCTGACCGAGGATCAAATTTTCAGGATTGATCACTATCTTGGGAAAGAGCTTGTGGAAAATCTTTCTGTTCTCCGATTCTCAAATCTAATTTTCGAACCATTATGGTCAAGGCAATACATAAGAAATGTACAATTGATATTCTCAGAAGATTTTGGTACTGAAGGACGTGGCGGGTACTTTGACAATTATGGTATTATTAGAGATATTATGCAGAACCATCTACTTCAAATTCTAGCCCTCTTTGCAATGGAAACCCCTGTTAGTTTGGATGCAGAGGACATTAGAAATGAAAAGGTCAAGGTTCTACGTTCGATGAGACCGATTAAACTTGAGGATGTAGTTTTAGGCCAATATAAGAACCACACAAGAGGAGGTGTTGCATATCCAGCTTATGTTGATGACAAAACTGTACCAAAGGGCAGTTTAACACCAACATTTGCCGCAGCTGCCCTCTTCATAGATAATGCACGATGGGACGGGGTTCCTTTTCTGATGAAAGCCGGAAAAGCATTGCATAATAAGAGAGCTGAGATTAGAGTACAGTTCAGGCACGTGCCGGGCAATCTGTACAATCGAAATTTCGGGGCCGATCTAGATAGAGCCACAAATGAACTTGTTATAAGAGTTCAGCCCGACGAAGCTATCTATTTGAAAATCAACAACAAAGTACCAGGACTAGGAATGAAGTTGGACCGCAGTCATTTGAATCTTCATTATGCAGCAAGATACTCGAAGGAAATACCAGATGCTTACGAGAGGCTACTTCTCGATGCAATTGAAGGAGAAAGAAGACTCTTTATACGCAGCGACGAACTCGATGCTGCTTGGTCACTCTTTACGCCCGTGCTGAATGAGATAGAAGATAAAAAGATAACTCCAGAATATTATCCTTACGGTAGTCGTGGTCCAGTTTGCGCTCACTATCTTGCAGCCAGATACAATGTACGATGGGGCGATCTTGGTTTAGATGTAGAACAATAA 1758 0.4204 MATLYSTHCRSFPSSSSTSFPPSNRFPAATVSLKSHPHLLHHLSVHTQQHDGAATVSPVENNHSGKRPRPEVLPVISLKESEVEVDFEKDESEVTVSITVVGASGDLAKKKIFPALFALYYEGFLPKHFTICGYARSKMTDVELRNMVSKTLTCRIDQRENCNEKMEQFLKRCFYHSGQYDSQENFAALDKKLKEHEGGRASNRLFYLSIPPNIFVHAVKCASLSASSGNGGWTRVIVEKPFGRDSESSAALTRSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIKLEDVVLGQYKNHTRGGVAYPAYVDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHNKRAEIRVQFRHVPGNLYNRNFGADLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSHLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLNEIEDKKITPEYYPYGSRGPVCAHYLAARYNVRWGDLGLDVEQ 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00744 585 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 100 279 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 NCBIfam glucose-6-phosphate dehydrogenase 97 577 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 88 576 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 95 282 IPR036291 -
Vifa1g00744 585 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 95 578 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PRINTS Glucose-6-phosphate dehydrogenase signature 259 287 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PRINTS Glucose-6-phosphate dehydrogenase signature 311 328 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PRINTS Glucose-6-phosphate dehydrogenase signature 329 345 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PRINTS Glucose-6-phosphate dehydrogenase signature 416 442 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 PRINTS Glucose-6-phosphate dehydrogenase signature 235 248 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 282 576 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vifa1g00744 585 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 269 576 - -
Vifa1g00744 585 Gene3D Dihydrodipicolinate Reductase; domain 2 268 577 - -
Vifa1g00744 585 Gene3D - 92 267 - -
Vifa1g00744 585 PIRSF G6PD 79 580 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa1g00744 585 FunFam Glucose-6-phosphate 1-dehydrogenase 268 577 - -
Vifa1g00744 585 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 269 275 IPR019796 GO:0004345|GO:0006006
Vifa1g00744 585 MobiDBLite consensus disorder prediction 50 70 - -
Vifa1g00744 585 FunFam Glucose-6-phosphate 1-dehydrogenase 92 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00744 Vifa-Chr1 125070030 125074704 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00744 K00036 - gmx:100793694 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00744 1 125070030 125074704 Vifa1g00744 1 125070030 125074704 ECH
Vifa1g00744 1 125070030 125074704 Vifa1g05378 1 833676134 833679387 PCT