Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01488 ATGGGTTGCACAGCATCGAAGCTGGACAACGAGGAAACCGTGATGCGCTGCAAGGAGCGGCATCGTTTAATGAAAGATGCTGTCTATGCGCGCCACCACCTAGCGGCAGCGCACTCCGACTACTGCCACTGCCTCCGCCTCACCGGTTCTGCACTCTACACTTTCGCCGCCGCCGAACCCCTCACAGTCGCCGAAGACACCCCTGCCGTCCTCCTTCACAAAACCACCAATATTTCCCAATCGTCATCACGTCCTCCTCCCTCCGCCGCCGCTTCAGCTAGCCCTAAACTCCCTCGCATAGTAACCTCCGGCGTCACGCGCCGCCGTCAACAGCCGTCGAGACTCCCTCACGTTCTCTCCGAATCGAGCCCCTGTTCGTCGCCTCGAAGCGAGTTTTCGAACTTCTCAGCCGCTCAACAACAACCTGAACCCATACCTACTTCACATCCGCCACAACCTCCTCTTCCCGCCGTCACTCGCCGCCGCAAACCGCCGCCGAAGCTCCCTCACATACTCTCCGAATCGAGCCTCTTCTCCTCGCCGCGAAGCGAATACTCGAATTTCTTCGCCACCGCGCACCAAGCTCAATCCACGCCTACTTCACAAGCCTCTTCCGTTTGGAATTGGGAGAATTTCTATCCTCCTCCTTCTCCTCCAGGCTCCGATTACTTTCGCCAACGCCAAAACCACAAACTGCAAACAACGCCGAATTTCGAAACGTCGGAATCGGAATCTGAATCGATGTACAATCCGTTCCGTTCAAACTCTCAACGCAATCGCAAAATTGATAACACTACAAACATCGATTCACAAGAACAAGAACAAAAGGCAGAACCAGAGATTTCCGAATCAGAAACGGAATCTGAAGATAAATACTTACATGAACAGGTTCAGACGGAGCGCGAGGAGGTTCGGTGCAGCGAGTGGGAGGACCGTTACAGTTCCTCGAGTTCGTCTGAGCATGAGGAAGGAGGCGTCGGAGTCACCTCACCGTCCAAGGCACAGTATGTCGCCGGAGGCTATGCTCCGGGCGCGAAGAATGACAAGGTCAGCGATGACGTGGCGGAGGCGAAGGTAGCGGTGAGACATAGGGATTTGAAAGAGATAGTGGAAGCGGTTAGGGAGAATTTTGAGAAAGCTGCAGTGGCCGGAGATCAGTTATCGGAGATGCTCGAGGTTAGCAGAGCGCACCTTGATCGGAGTTTTAAGCAATTGAGGAAAACACTTTACCATTCAAATAGTGTACTCAGCAAGTTAAGCTCGAGTTGGACCTCTAAACCGCCGTTGGTGGTTAAGTACCGGCTCGACGCCGGTTCGTTGGACGGACCGGGCGGTTCAAAGAGCCTGGGTTCCACTTTGGAACGCCTTTTGGCTTGGGAGAAGAAGCTGTATCAGGAAGTGAAGGCAAGAGAATGTGTGAAGATTGAACATGAAAAGAAACTGTCAGCTCTGCAGAGTCTAGAATGCAAAGATGGTGATGAAGCAAAGCTAGATAAGACCAAGGCTTCCATAACAAGGTTGCAGTCATTAATTGTTGTTACATCTCAAGCTGTATCCACCACCTCAGCTGCCATTAATGGCCTTAGGGATGCTGATCTTGTTCCTCAGCTTGTTGATCTCTGCCGTGGAATCATGTATATGTGGAAATCAATGCATGAGTACCATGAAATCCAAAGCAACATTGTGCAGCAAGTCCGTGGGCTTGTGAACCAATCATCCAAAGGTCACTCAACATCTAAATCACACAAGCAGGCAACAAGGGATCTTGAATCAGCTGTGTCAGCTTGGCATTCCAGTTTCTGCCGCCTGATAAAGTTTCAACGTGAGTTCATCCTTTCTCTGCATGGCTGGCTCAAGTTGAACCTTATTCCAGTAAAAAATGACAGCAGCAGCAGCAGCAGCAACAATAACAGTGAATCATCTCATGTGTTTTCTTTCTGTGATGAATGGAAACTTGCCCTCGACCGTGTTCCGGACACAGTTGCTTCAGAAGCAATCAAGAGCTTCATCAACGTTGTGCATGTGATATCAGTGAAGCAATCTGAGGAGCTGAAGATTCAGAAGAGAACTGAGAGTGCCTCCAGGGAACTTGAGAAGAAATCTTCATCTCTGAGAAGCATAGAAAGGAAGTTTTACAACTCGTATTCTATGGTAGGCATAACACCTCCTGAGTCTGGTCCTGCTGATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAGAAACTGAAACTAGCATCTTACCAAAGACGTGTTGAAGATGAAATGGTGAGGCATTCGAAAGCTGTTGAGGTGACCAGAGCTATGACACTCAACAATCTTCAGACTGGTTTACCTGGAGTGTTCCAGGCAATGGCAAGTTTTTCTTCATTGTTCACTGAGGCTCTTGAGTCTGTATGTAGCCATTCACGTACCATGAATTAA 2427 0.4981 MGCTASKLDNEETVMRCKERHRLMKDAVYARHHLAAAHSDYCHCLRLTGSALYTFAAAEPLTVAEDTPAVLLHKTTNISQSSSRPPPSAAASASPKLPRIVTSGVTRRRQQPSRLPHVLSESSPCSSPRSEFSNFSAAQQQPEPIPTSHPPQPPLPAVTRRRKPPPKLPHILSESSLFSSPRSEYSNFFATAHQAQSTPTSQASSVWNWENFYPPPSPPGSDYFRQRQNHKLQTTPNFETSESESESMYNPFRSNSQRNRKIDNTTNIDSQEQEQKAEPEISESETESEDKYLHEQVQTEREEVRCSEWEDRYSSSSSSEHEEGGVGVTSPSKAQYVAGGYAPGAKNDKVSDDVAEAKVAVRHRDLKEIVEAVRENFEKAAVAGDQLSEMLEVSRAHLDRSFKQLRKTLYHSNSVLSKLSSSWTSKPPLVVKYRLDAGSLDGPGGSKSLGSTLERLLAWEKKLYQEVKARECVKIEHEKKLSALQSLECKDGDEAKLDKTKASITRLQSLIVVTSQAVSTTSAAINGLRDADLVPQLVDLCRGIMYMWKSMHEYHEIQSNIVQQVRGLVNQSSKGHSTSKSHKQATRDLESAVSAWHSSFCRLIKFQREFILSLHGWLKLNLIPVKNDSSSSSSNNNSESSHVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIQKRTESASRELEKKSSSLRSIERKFYNSYSMVGITPPESGPADGQGLDARDPLAEKKLKLASYQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQAMASFSSLFTEALESVCSHSRTMN 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01488 808 MobiDBLite consensus disorder prediction 233 331 - -
Vian9g01488 808 PANTHER UNCHARACTERIZED 1 803 - -
Vian9g01488 808 MobiDBLite consensus disorder prediction 273 318 - -
Vian9g01488 808 MobiDBLite consensus disorder prediction 233 272 - -
Vian9g01488 808 MobiDBLite consensus disorder prediction 104 143 - -
Vian9g01488 808 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vian9g01488 808 Pfam Protein of unknown function (DUF632) 366 674 IPR006867 -
Vian9g01488 808 MobiDBLite consensus disorder prediction 144 162 - -
Vian9g01488 808 MobiDBLite consensus disorder prediction 76 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01488 Vian-Chr9 30962634 30968230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01488 1 89 Acyl Lipid Metabolism Gene Families AT2G27090 31.633 1.25e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01488 - - gmx:100792843 1198.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01488 9 30962634 30968230 Vian9g01488 9 30962634 30968230 ECH
Vian9g01488 9 30962634 30968230 Vian2g00448 2 5196411 5201484 PCT