Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00448 ATGGGTTGCACGGCGTCCAAGCTAGAAAACGAGGACACCGTGCGTCGTTGCAAGGACCGCCGCCGTCTCATGAAGGACGCCGTCTACGCGCGCCACCAACTCGCTGCCGCCCACTCCGACTACTGCCGTTCCCTCCGCCTTACCGGCTCCGCCCTCTCCACCTTCGCCGCCGGGGAACCCCTCTCCGTCTCTGACCACACTCCCGCCGTCTTCCTCAACAACTCCCAACAACCACCCCCTCCCATTCACCACACTCGCCCACCCTCACCACCTCGCCACCACCCCCACCACTCTCCACCACCCTTCAACCCTTCCCCGCCGCCGAAACTCGCCCCCATCCAACCCCGCCGCCGCAAGCCGCCGCCTCCGAAGCTACCCCATATTCTCTCCGACTCGAGCCCCTCCTCCACGCCGCGAAGCCAAGCGTCGAATTTTCCTTCGAACTTTTTCCCCACCGCGCATTCCACATACTCCTCCACCCCTTCCCAAACCTCCTCTGTTTGGAACTGGGAAAACTTCTACCCCCCTCCACCTCCTCCTGCTTCCGATTACTTCCCCGAAGAACACCAACATCAACACCAACACCAACAAAAACTCTCGCAGGCTCGGGCACAAACACAAACGCAAACACCTTCCCTTCACTCTCACAAAACACAAACACCCTCTCATTACTCCCACAAAACCCAACCCACCAATCCTCAAATTCATGACTCCGACTCCGAGAGATCTGAATACGATTACTTCGACGGAAAACACGAGACTCAAAAAACTTACTCCCACTCTCGCTCTCCCTCTCACATTCACTCTGATTCTCACTCTCATCACCATCTTCCCGAAGAGTATACCGAGACTGAGAGGGAAGAGGTTCAGTGCAGTGAGTGGGGGGATCATTACAGCACCACAAGTTCATCCGATGACGATGATGATGGGGTGGAGGAGGATGTGGAGTCGCGGTCCGAGATCGGGACCCGGTCGAATTTCGGGTCGTCCATGCGGGCCGAGTCCGTTGCGGCTGGCGGCGGCGCTAAGGGGTTCGACGCCGCGTCCTCCGTCGCGGAGATGAAGATGGTGGTGAGGCATAGGGACTTGAGGGAGATCGTGGAAGCTATTAAGGAGAATTTTGATAATGCTGCTTCCGCCGGAGATCAGGTTTCAGAGATGCTCGAGATCAGTAAGGCTCAGCTCGATCGCAGCTTCAAGCAATTGAGGAAGACTGTGTATCACTCGAGCAGCATATTGAGCAATCTGAGCTCAAGTTGGACCTCGAAACCACCACTGGCGGTTAAGTACCGGCTGGACACCGGTTCGCTGGATGAACCGGGCGGTTCAAAGAGTCTCTGCTCCACCATAGAACGGCTTTTGGCGTGGGAGAAAAAGCTGTACGAGGAGGTTAAGGCTAGAGAAGGTGTTAAGATCGAACATGAAAAGAAATTGTCAGCTCTGCAGACTCAGGAATACAAGGGAGAGGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCATTGATAGTTGTCACTTCTCAGGCTGTGTCTACCACCTCAACTGCCATTGTTGGCCTTAGGGACTCTGCTCTGGTCCCTCAGCTTGTTGCTCTCATTCATGGATTTATGTACATGTGGAAAGCAATGCATAATTACCATGAAATTCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTTGTGAACAGATCTTCAAGAGGTGACTCCACTTCTGAACTGCACAGGCAGGCTACTCGGGACCTCGAAGCAGCCGTGTCAGCCTGGCACTCCAGTTTTTGTCGCCTGATAAAGTTTCAGCGGGAGTTCATCCACTCCTTGCATGGCTGGTTCAAGCTCAGTCTTCTTCCAGTGGACAATGATAACATCAACAACAGCAGGGACAACTCTGATACATACCACTTTTTTGATGAATGGAAACTGGCACTTGACCGTGTTCCAGACACGGTTGCATCTGAAGCCATAAAGAGTTTTATCAATGTTGTCCATGTGATATCTTCGAAGCAAACTGAAGAGCTGAAGATCAAGAAAAGAACAGAGACAGCATCGAAGGAACTTGAGAAAAAGGCATCCTCTGTGAGAAACCTAGAGAGGAAGTTCTACAGTTCATATTCTATGGTAGGAATTAGCCTTCCTGATACAGCAGCTGACAATGGACAGGGTTTGGATGCTCGTGATCCACTGGCGGAGAAAAAACTGGAACTGGCAACCTGCCAAAGGCGCGTTGAAGATGAAATGCTGAGGCATTCAAAAGCTGTGGAGGTAACAAGAGCCATGACTCTGAACAATTTGCAGACAGGGTTGCCTGGTGTGTTTCAGGCATTGACAAGTTTCTCTTCCTTGTTCACGGAGGCTCTTGAATCAGTGTGTACTCGTTCTTATGCCATCAAGTAG 2406 0.5216 MGCTASKLENEDTVRRCKDRRRLMKDAVYARHQLAAAHSDYCRSLRLTGSALSTFAAGEPLSVSDHTPAVFLNNSQQPPPPIHHTRPPSPPRHHPHHSPPPFNPSPPPKLAPIQPRRRKPPPPKLPHILSDSSPSSTPRSQASNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEHQHQHQHQQKLSQARAQTQTQTPSLHSHKTQTPSHYSHKTQPTNPQIHDSDSERSEYDYFDGKHETQKTYSHSRSPSHIHSDSHSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDGVEEDVESRSEIGTRSNFGSSMRAESVAAGGGAKGFDAASSVAEMKMVVRHRDLREIVEAIKENFDNAASAGDQVSEMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLDEPGGSKSLCSTIERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIVVTSQAVSTTSTAIVGLRDSALVPQLVALIHGFMYMWKAMHNYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLEAAVSAWHSSFCRLIKFQREFIHSLHGWFKLSLLPVDNDNINNSRDNSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQTEELKIKKRTETASKELEKKASSVRNLERKFYSSYSMVGISLPDTAADNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00448 801 MobiDBLite consensus disorder prediction 237 293 - -
Vian2g00448 801 MobiDBLite consensus disorder prediction 197 236 - -
Vian2g00448 801 Coils Coil 683 703 - -
Vian2g00448 801 PANTHER UNCHARACTERIZED 1 795 - -
Vian2g00448 801 MobiDBLite consensus disorder prediction 69 332 - -
Vian2g00448 801 Pfam Protein of unknown function (DUF632) 363 667 IPR006867 -
Vian2g00448 801 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vian2g00448 801 MobiDBLite consensus disorder prediction 129 171 - -
Vian2g00448 801 MobiDBLite consensus disorder prediction 94 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00448 Vian-Chr2 5196411 5201484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00448 1 97 Acyl Lipid Metabolism Gene Families AT2G27090 30.476 9.62e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00448 - - gmx:100815888 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00448 2 5196411 5201484 Vian2g00448 2 5196411 5201484 ECH
Vian9g01488 9 30962634 30968230 Vian2g00448 2 5196411 5201484 PCT