Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01485 ATGAAGCTTGCTATGAGAGTAGCTTCAATCCAGCCACGTGCATCATCCTCTATTTCTCAATACAACCCTACTTGTCCATTTTTTGAATCCAACATAAGCTCACAATTCAGCAAGTCTTTGCCATCATGGAACCAACTCAAACCTCTCTCAACCAAATGCAACTTTCCCAAACTTAGACACAAATGGAAGCAATACCAAGGAATTGACCATTGGGAAGGTTTGTTGGATCCTCTTGATGATAATCTACGTTGGGAAATTTTAAGATATGGCCACTTTGTAGATGCTACATATAACTCTTTTGATTTTGACCCTACTTCTCTTACCTATGCTACCTCTCTTTATTCAAAAAAGTCACTTTTGAAAAAGTGTGGTCTGGAAAATTATGGGTATAAGATATCAAAATATTTATATGTCACGTGTGGAATTCATGTGCCAACATGCATAAATAAAATTTTCAAAAAGTTGTGTATCAAATCTAGTTTAGTCGGATACATAGCAGTATGTGTAAATGAGAAAGAAATTGTTCGACTCGGCCGACGAGACATTGTTATTGCTTTTAGAGGAACGGTTACATGTTTGGAGTGGTTGGAAAACTTACGAGTCTTCTTAACAAACTTGCCAGGTCTTGTCACAGGAGAAGATGATGTTGGTCCCATGGTGCAGAAAGGGTTTTTGAGTCTTTACACATCCAAAACCTCTACACGTGCAAGTTTGCATGAGATGATAAGAAAAGAGGTTGGAAGAGTGATTCAAAGATACACTAACGAACCTCTTAGTTTAACCCTAACGGGTCATAGTCTTGGAGCCGCACTTGCGATTTTGAGCGCATATGATATAACCACCACTTTCAAGAATGCACCAATGGTTACCGTTATTTCATTTGGTGGACCTCGTGTGGGAAATGAGAGTTTTAGGAAACAATTGGAACAAAAAGGGATTAAGATACTAAGAATAGTAAACTCTGATGATGTTGTTACAAAAGTTCCGGGGTTTATTGTGAACTTAGATGAATTGGTAAATAATGAAAATGTTGGTGTGGGAATTTGGTCAAAATGGTTGTACAAGTACATAGAAAACATGCAATTGGAATATGTTGACATTGGACAAGAGTTGAGACTAAGTAGTAGAGAGTTTTCATGTCTCAATAAGAGAGATGTTGTTATGTGTCATGACCTCAAAACATATCTTCATTTGGTCAAAAACTTTGTAAGCTCCTCTTGTGCTTGCAAACATAAAAAGATTCACTCCATTTAG 1254 0.3716 MKLAMRVASIQPRASSSISQYNPTCPFFESNISSQFSKSLPSWNQLKPLSTKCNFPKLRHKWKQYQGIDHWEGLLDPLDDNLRWEILRYGHFVDATYNSFDFDPTSLTYATSLYSKKSLLKKCGLENYGYKISKYLYVTCGIHVPTCINKIFKKLCIKSSLVGYIAVCVNEKEIVRLGRRDIVIAFRGTVTCLEWLENLRVFLTNLPGLVTGEDDVGPMVQKGFLSLYTSKTSTRASLHEMIRKEVGRVIQRYTNEPLSLTLTGHSLGAALAILSAYDITTTFKNAPMVTVISFGGPRVGNESFRKQLEQKGIKILRIVNSDDVVTKVPGFIVNLDELVNNENVGVGIWSKWLYKYIENMQLEYVDIGQELRLSSREFSCLNKRDVVMCHDLKTYLHLVKNFVSSSCACKHKKIHSI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01485 417 CDD Lipase_3 130 337 - -
Vian9g01485 417 SUPERFAMILY alpha/beta-Hydrolases 110 375 IPR029058 -
Vian9g01485 417 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 55 412 - -
Vian9g01485 417 Pfam Lipase (class 3) 183 331 IPR002921 GO:0006629
Vian9g01485 417 Gene3D alpha/beta hydrolase 61 415 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01485 Vian-Chr9 30906906 30908159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01485 57 411 Acyl Lipid Metabolism Gene Families AT2G44810 55.710 1.11e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01485 K16818 - gmx:106798329 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01485 9 30906906 30908159 Vian9g01485 9 30906906 30908159 ECH
Vian9g01485 9 30906906 30908159 Vian2g00451 2 5294453 5295679 PCT