Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00451 ATGGACAAAATGATGAACGCCAACATGCCTCAGTTACGATCATCGTCGTCAATGTCACCACCATTGACATCATTGACGAACAAAGTTGGAAAGAGATGGAAGGAATACCAAGGAATGAACAATTGGAACGGTTTGTTAGACCCCTTGGACGAGAACCTTCGCGCCGAGATTCTCCGCTATGGCCAATTCGTTGAGGCCGCGTATAAGTCCTTCGAATTCGACCCTTCATCCCCTGACTACGCCACATGCAAGTTCCCAAAAAGGACACACTTGGAAAGGTGCGGATTACACAACACCGGTTACAAGGTAACCAAGCACCTACGTGCAACCTCGGGGATCAAACTACCTACCTGGGTGGACAAAGCTCCGAGTTGGGTGGCAACACAATCAAGCTACATTGGGTACGTGGCAGTGTGTCACAACAAAGAGGAGATCAAACGACTGGGTCGAAGAGACATTGTTGTCGCATTCAGAGGTACCACCACATGTCTTGAGTGGCTCGAAAATCTTCGAGCCACTCTGAATAACGTGGTTCAACCTACCGCAACTGGGATTACGGCGGCAGAGCCATGCAGTGTGGAAGAAAATGGAGCTATGGTGGAAAGTGGGTTTCTGAGTTTGTACACGTCAAAGCTGAGTGACAACCCTTCGTTTATGAGCTTGCAAGATATGGTGAGAAAAGAGATTGGTCGGATCCTGAAAACTTACGAAGGAGAAAACTTGAGTTTGACATTTACTGGGCATAGTTTGGGGGCGGCATTGGCGACTCTAACCGCGTATGACATAAGAAACAGTTTTCTCCGGCCACCGCATGTGACGGTGATCTCCTTCGGCGGGCCCCGCATCGGGAACCGGAGCTTTCGTCGGCGGCTGGAGGAGCAGGGGACTAAGGTGTTGCGGATAGTGAACTCGGATGATGTTATAACCAAGATACCGGGATTTGTTTTTGATGAGGTGGAGAAAAAGGAAGGTGACGTGGAGGGAAAGAGAGGTGAACACGTGGCTAGTTTTCAGAGATGGATGCGCAGGCGCGTGGAAGAGGTACAGTGGCTGTTGTACTCGGAGATCGGGGAGGAGCTTCGGCTTTGTAGCAGGGATTCTCCGTACCTTAGGGGAATTAACATTGTAACGTGTCATGATTTGAACATCTATCTGCATCTTGTTGACGGCTTTGTCAGTTCCACATGTCCCTTTAGATCCACTGCTAAGAGGTTTCTCCGCCATTAA 1227 0.4939 MDKMMNANMPQLRSSSSMSPPLTSLTNKVGKRWKEYQGMNNWNGLLDPLDENLRAEILRYGQFVEAAYKSFEFDPSSPDYATCKFPKRTHLERCGLHNTGYKVTKHLRATSGIKLPTWVDKAPSWVATQSSYIGYVAVCHNKEEIKRLGRRDIVVAFRGTTTCLEWLENLRATLNNVVQPTATGITAAEPCSVEENGAMVESGFLSLYTSKLSDNPSFMSLQDMVRKEIGRILKTYEGENLSLTFTGHSLGAALATLTAYDIRNSFLRPPHVTVISFGGPRIGNRSFRRRLEEQGTKVLRIVNSDDVITKIPGFVFDEVEKKEGDVEGKRGEHVASFQRWMRRRVEEVQWLLYSEIGEELRLCSRDSPYLRGINIVTCHDLNIYLHLVDGFVSSTCPFRSTAKRFLRH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00451 408 Gene3D alpha/beta hydrolase 32 407 IPR029058 -
Vian2g00451 408 Pfam Lipase (class 3) 154 314 IPR002921 GO:0006629
Vian2g00451 408 SUPERFAMILY alpha/beta-Hydrolases 54 315 IPR029058 -
Vian2g00451 408 Coils Coil 407 408 - -
Vian2g00451 408 CDD Lipase_3 128 320 - -
Vian2g00451 408 MobiDBLite consensus disorder prediction 8 24 - -
Vian2g00451 408 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 22 403 - -
Vian2g00451 408 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00451 Vian-Chr2 5294453 5295679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00451 18 406 Acyl Lipid Metabolism Gene Families AT2G44810 63.077 2.12e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00451 K16818 - gmx:100816744 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00451 2 5294453 5295679 Vian2g00451 2 5294453 5295679 ECH
Vian9g01485 9 30906906 30908159 Vian2g00451 2 5294453 5295679 PCT