Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01481 ATGGCCACTGCCAATCCCTTTGATTTATTGGGCGACGATGCGGAGGACCCGTCGCAGTTGATCGCGGCCGAGCAGTTGAAGGCCGCCGCGGCGCCGAAGAAAGAGCAGGGCAAGGCTGGACCCCGCGCTGGTGCGGTGGCTCAGCAGAGCAAGCCGGCTCAGTTGCCTTCCAAGCCAGTTCCTCCCACTCAGGCTGTGAGGGAGGCAAAAAATGAAACCTCTTATGGTGGCCGTGGAGGTGGACGAGGATATGGACGTGGGCGGGGTGGTGGCAGTGGCTTTGGTCGTGATTTTTCCAATGAAGAGAACTCATCTGCCCCTGCTAACCAAGGATCTTTTGAAGGGGAGGCTGGGAATCCCTCAGAAAGGCGTGGTTATGGTGCACCACGTGGGCCTTATCGTGGCAGTGGTCGTGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGTTGGTGATGATGGACGCCCTAGAAGAGCCTTTGAACGCCACAGTGGGACTGGACGAGGAAATGAATACAAACGGGATGGCGCTGGACGTGGAAACTGGGGTACCCAATCTGATGAAATTGCTCAGGTCACTGAGGAAGTGGCGGATGAAACTGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGTGAGGAAGATGCTGCAGGTGGAAACAAGGACAGTCCTGCTACTGAAAATGAAGAGAAGGAACCAGAGGACAAGGAGATGACCCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCGCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCAACCATGCAGCCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCTGAAAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCAATGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACAAGTGGTCGTGGAAGAGGACGTGGTCGTGGTGCTCGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTTGCAGCTCCATCAATTGAGGATCCTGGCCAATTCCCAACTTTGGGTGGCAAGTGA 1095 0.5224 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAPKKEQGKAGPRAGAVAQQSKPAQLPSKPVPPTQAVREAKNETSYGGRGGGRGYGRGRGGGSGFGRDFSNEENSSAPANQGSFEGEAGNPSERRGYGAPRGPYRGSGRGRRGGFSNGEVGDDGRPRRAFERHSGTGRGNEYKRDGAGRGNWGTQSDEIAQVTEEVADETEKNFGDEKPVGEEDAAGGNKDSPATENEEKEPEDKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFATMQPLSNKKDNDEIFIKLGSEKDKRKDALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGARGGYSGNAGSNVAAPSIEDPGQFPTLGGK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01481 364 MobiDBLite consensus disorder prediction 222 237 - -
Vian9g01481 364 MobiDBLite consensus disorder prediction 194 214 - -
Vian9g01481 364 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 363 IPR039764 GO:0003723
Vian9g01481 364 SMART HABP4_PAI_RBP1_2 155 263 IPR006861 -
Vian9g01481 364 MobiDBLite consensus disorder prediction 314 364 - -
Vian9g01481 364 MobiDBLite consensus disorder prediction 97 116 - -
Vian9g01481 364 MobiDBLite consensus disorder prediction 145 174 - -
Vian9g01481 364 MobiDBLite consensus disorder prediction 24 237 - -
Vian9g01481 364 Pfam Stm1 1 80 IPR019084 -
Vian9g01481 364 Pfam Hyaluronan / mRNA binding family 155 262 IPR006861 -
Vian9g01481 364 Gene3D - 153 266 - -
Vian9g01481 364 Coils Coil 238 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01481 Vian-Chr9 30818983 30822297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01481 K13199 - gmx:100791259 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01481 9 30818983 30822297 Vian9g01481 9 30818983 30822297 ECH
Vian9g01481 9 30818983 30822297 Vian2g00456 2 5408344 5412249 PCT