Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00456 ATGGCAACCATGAACCCCTTTGATTTGTTGGGTGACGACGCAGAGGACCCTTCTCAGCTCATCGCGGCCGAGCAACTCAAGGCGGCGGCAGCGGCTGCGGCGGCCGCGGCGGCTCCGAAGAAGGCGCCTGTTCAGCAGAACAAGCCGGCTCAGCTGCCCACTAAGCCTCCTCCTCCTGCTCAAGCGGTTAGGGAGTCCAGAAATGATCCTGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGTGGACGTGGGTTTGGACGTGGTCGTGGGTTTGGTAGGGACTCTTCCAATGATGAGAATTCGTTTCCTGGCACTGGAGCTCCTTACAATTCGGGTTCTTTTGAAGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGTGGTTATGGTGGACCACGAGGTCCTTATCGTGGTGGGCGCCGTGGAGGTTTTAGCAATGGTGAAACTGGTGAAGGTGAAGAAGGACGCCCTCGACGAGCATTTGATCGTCGCAGTGGGACGGGCCGAGGAAATGAATTTAAACGTGAAGGTGCTGGACGTGGTAACTGGGGAACGCAAAATGATGATATTACCCAGGAAACTGAGGAAGTTGTGAATGAAACTGAAAAGAATTTGGGAGATGAGAAGCCTGCAGTTGAAGTAGAAGTAGCTGATGGAAACAAGGACAATCCTGCTAATGACACTGAAGAGAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATACGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGGAAGAAAGGTGGACACTAAAGAGTTTGCATCCATGCAACCCTTGTCAAGCAAAAAGGACAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGCGAAAGGAGGCTTTTGAGAAGGAAGAAAAATCCAAAAAGTCTGTTAGCATCACCGAATTCCTGAAGCCTGCTGAAGGGGAAACTTACTACAGCCCAGGTGGACGTGGTAGGGGCCGTGGTCGTGGCTCTCGTGGTGGTTTTCGTGGAGGTGTTACCAACAGTGCACCTGCCCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGGCAAGTGA 1098 0.5155 MATMNPFDLLGDDAEDPSQLIAAEQLKAAAAAAAAAAAPKKAPVQQNKPAQLPTKPPPPAQAVRESRNDPVRGGRGGGRGGGRGFGRGRGFGRDSSNDENSFPGTGAPYNSGSFEEGDAGKSSERRGYGGPRGPYRGGRRGGFSNGETGEGEEGRPRRAFDRRSGTGRGNEFKREGAGRGNWGTQNDDITQETEEVVNETEKNLGDEKPAVEVEVADGNKDNPANDTEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDTKEFASMQPLSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGETYYSPGGRGRGRGRGSRGGFRGGVTNSAPAPSIEDPGHFPTLGGK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00456 365 MobiDBLite consensus disorder prediction 288 309 - -
Vian2g00456 365 MobiDBLite consensus disorder prediction 150 175 - -
Vian2g00456 365 Pfam Stm1 1 77 IPR019084 -
Vian2g00456 365 Pfam Hyaluronan / mRNA binding family 156 263 IPR006861 -
Vian2g00456 365 Gene3D - 154 267 - -
Vian2g00456 365 MobiDBLite consensus disorder prediction 30 237 - -
Vian2g00456 365 MobiDBLite consensus disorder prediction 288 365 - -
Vian2g00456 365 SMART HABP4_PAI_RBP1_2 156 264 IPR006861 -
Vian2g00456 365 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 364 IPR039764 GO:0003723
Vian2g00456 365 MobiDBLite consensus disorder prediction 195 237 - -
Vian2g00456 365 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00456 Vian-Chr2 5408344 5412249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00456 K13199 - gmx:100814825 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00456 2 5408344 5412249 Vian2g00456 2 5408344 5412249 ECH
Vian9g01481 9 30818983 30822297 Vian2g00456 2 5408344 5412249 PCT