Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01439 ATGCATCATAAGAAATCCGAACTTCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCCGCTCCGCCACCACCCCAACCACCACCACCACCACCCTATCCCCAACCTCAACCTCCAAACCCAAACCTCAACAGTCCCCTATAAAAGACCCTCCCTCTGCAAATCCCCAATCCTCAACAGATTTCCAAAACCGTGCCGCGCCACCGTTCCCTCCGCCGCCGCCACCACCTGGGTGTCCTCCGTCGTCTCCCTCCGTTGCCGCCTACGCCTCTTAATCTTCTTCTCCCTACCCTTCTTCTACTTCCTTGTCTCCCACCCTACAAACTCCTTCATCCTTGATTTCCTCGCCGCGTTCTTCTTCTCCGCCGCGCTCTTCTTCTCGGTCAGCCTCGCCCTGCCGCGAATCCCCTCCATCCGCTTCTTCCTCAAGCCCGAGGCCCGGCCCGCGCTGAAGTTACCCGTGTTCTGGGCCCGCCCGGCCCAGCCCGAGTTTCAATTCTGCGTGGTTGCGTACCCGAACGGCGACGTTTACGAGGGGGAGTTCAGAAGAGGGAAGTGTTGTGGGAGTGGGGTTTACTACTACAGCATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTACGATGGGTTTGGGGTGGAGACGTGGGCGAAGGGGAGTAGGTACCGGGGGCAGTACCGCCAGGGTCTTCGGCACGGGTTCGGGGTGTACCGGTTTTACACCGGCGATGTTTATGCCGGGGAGTGGGCCAGTGGGCAGAGTCACGGCTGTGGGGTGCACACGTGCGAGGATGGCAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTCAAGCATGGCCTTGGACACTATCATTTTAGCTTTGTGGATTATGGGAATTTCTTACTTATGGACCATGTTTTGGTGGCCGTGTTATGTTTGGCTTGCGGCAATTTCTTCAGACTTAACCTTTTGCTGCTTTCATGGGTTGTCTTAGTTTACAAGAAAGAGGTATCTGCTCCCAAGGATAGAATCAGTTTCAAAGGCATGCAGTTAACGAAATTTGGTGCTCCATCCTGGATGCTTGACCTTGAATATGGGTTCCTCTCTTTTAAAAATGGAGATACATATGCTGGTGAATACTTTGCGGATAAGATGCATGGATATGGGGTATATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAAGGAATTGGAATGTATGCATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCATTGACACTCCCAGCTCACAGAGTGCCACCTATCCTATTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTAAATGCAGTGCAGGAAGCAAGAAGAGCAGCTAAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAATAGAGCAGTAACAGCAGCTAACAGAGCAGCCAATGCAGCTAGAGTAGCTTCTGTCAAGGCTGTCCAAAATCAAATGCATCATAATGTCAACAGCAAGAGCATTCCAATCCCCATTGTGTGA 1545 0.5217 MHHKKSELQIGKESTGVSSDFNPLRHHPNHHHHHPIPNLNLQTQTSTVPYKRPSLCKSPILNRFPKPCRATVPSAAATTWVSSVVSLRCRLRLLIFFSLPFFYFLVSHPTNSFILDFLAAFFFSAALFFSVSLALPRIPSIRFFLKPEARPALKLPVFWARPAQPEFQFCVVAYPNGDVYEGEFRRGKCCGSGVYYYSMSGRYEGDWVEGKYDGFGVETWAKGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFSFVDYGNFLLMDHVLVAVLCLACGNFFRLNLLLLSWVVLVYKKEVSAPKDRISFKGMQLTKFGAPSWMLDLEYGFLSFKNGDTYAGEYFADKMHGYGVYSFANGHCYEGSWHEGKRQGIGMYAFRNGETQSGHWQNGVIDTPSSQSATYPISPVGVNHSRVLNAVQEARRAAKKAYDVAKVDERVNRAVTAANRAANAARVASVKAVQNQMHHNVNSKSIPIPIV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01439 514 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 170 469 - -
Vian9g01439 514 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 255 294 - -
Vian9g01439 514 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 379 424 - -
Vian9g01439 514 Pfam MORN repeat 249 271 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 396 417 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 272 290 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 373 394 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 180 200 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 203 225 IPR003409 -
Vian9g01439 514 Pfam MORN repeat 226 248 IPR003409 -
Vian9g01439 514 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 209 254 - -
Vian9g01439 514 Gene3D - 255 294 - -
Vian9g01439 514 Gene3D - 362 443 - -
Vian9g01439 514 Gene3D - 168 209 - -
Vian9g01439 514 Gene3D - 210 254 - -
Vian9g01439 514 MobiDBLite consensus disorder prediction 1 39 - -
Vian9g01439 514 SMART morn 270 291 IPR003409 -
Vian9g01439 514 SMART morn 224 245 IPR003409 -
Vian9g01439 514 SMART morn 371 392 IPR003409 -
Vian9g01439 514 SMART morn 247 268 IPR003409 -
Vian9g01439 514 SMART morn 178 199 IPR003409 -
Vian9g01439 514 SMART morn 394 415 IPR003409 -
Vian9g01439 514 SMART morn 201 222 IPR003409 -
Vian9g01439 514 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 174 289 - -
Vian9g01439 514 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 363 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01439 Vian-Chr9 30296270 30300933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01439 216 429 Acyl Lipid Metabolism Gene Families AT1G10900 26.852 3.67e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01439 - - mesc:110615502 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01439 9 30296270 30300933 Vian2g01336 2 27563798 27570035 PCT