Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01336 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAATCCTTCGCCGCCCCTGCAATACCAGAAACACCCTCACCATCGTCACCAATTCTATCCTCAAATCGAAATCGACATCTCCCCACCGCAACAGCGCACCGGACCGCCGCAGGTGACCCCTCCGCCCTCGCTATCAAAGCAGAAGCATCTCCATCCGCACGCCCAGCCGCCTCTCTTCAAGTCACACAACGCCGCCTTCTTTTCCGTAACGGTCGCCGCCAAAAGCGCCGCCTTCCGCGCTCTGCGTCGCGTGAGGCGGCAGCGCGCGTTGCTCCTACTCGCCGTGCCGCTCCTCTACCTCTACTTCCTCGTCTCGCGGTCCTTCCTCCTCGACCTCCTTTCCGCGATCGCCTTCTCCGCCGCGCTTGTGTTCTCTCTCAACCTCGCGTTCCCGCTGCCGCTCCGCTCTATTCGGCTCAAGTCGCCGTCTGCGGTGGTCGCCCGCCCCGCGCCGCAGCTGCCGGTGTTCTGGACGATTGGGTCGCGGCCTAAGTCGGAGAAGCGCGTGGCGTCGGGGTGCTGGGTGCAGGTCTTCGGAAACGGCGACGTTTACGAGGGGGAGTTTCACCGAGGGAAGTGTTCCGGCAGCGGGGTGTATTATTATAGTAGGAGTGGGAGGTACGAAGGGGATTGGGTTGATGGAAAATACGATGGCTATGGGGTGGAGACTTGGGCGCGTGGGAGTCGCTACCGGGGGTGTTACCGGCAGGGTTTGAGACACGGGTTTGGGGTGTATAGGTTTTACACCGGGGATGTGTACGCCGGCGAGTGGTCTAATGGACAAAGCCACGGGTGTGGGGTTCACACATGCGAGGATGGGAGTAGATACGTTGGAGAGTTCAAGTGGGGTGTCAAGCATGGCCTTGGTCATTACCATTTCAGAAATGGTGATACATATGTGGGTGAATACTTTGCGGACAAGATGCATGGTTTTGGGATATATCATTTTGCAAATGGCCATCTATATGAAGGAGCCTGGCATGAAGGTAGAAGACAAGGACTTGGCATGTATACATTTAGAAATGGTGAAACCCAATCCGGTCACTGGCAAAATGGACTTCTTGACATTCCAAGCACTCAAAGCACTACTTATCCAGTTTCTCCTGTTGGTCTATCTCATTCCAAAGTCCTCAATGCAGTGCAGATAAGGAAATATCGGGGAGATTTTTGTGAAAGTCAAGAGTTGCTTGCCACCCTTTTGAGAGCTCGAAGAACTCGAGAGGATGCAAGACGAGCAGCAGCGAAAGCATATGAAGTGGCAAAGGTAGATGAAGGGGTAAACCGAGCTGTAGCAGCTTCTAATAGAGCAGCCAATGCAGCCAGAGTAGCTGCTGTGAAAGCTGCACAAAAGCGGATGCATCAGGTTAACAATGAAAGCTTCGCAATTCCTGTTATGTAA 1461 0.5414 MHQKKSEVQIGKESVGVSSDFNPSPPLQYQKHPHHRHQFYPQIEIDISPPQQRTGPPQVTPPPSLSKQKHLHPHAQPPLFKSHNAAFFSVTVAAKSAAFRALRRVRRQRALLLLAVPLLYLYFLVSRSFLLDLLSAIAFSAALVFSLNLAFPLPLRSIRLKSPSAVVARPAPQLPVFWTIGSRPKSEKRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYVGEYFADKMHGFGIYHFANGHLYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGLLDIPSTQSTTYPVSPVGLSHSKVLNAVQIRKYRGDFCESQELLATLLRARRTREDARRAAAKAYEVAKVDEGVNRAVAASNRAANAARVAAVKAAQKRMHQVNNESFAIPVM 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01336 486 Gene3D - 280 325 - -
Vian2g01336 486 Gene3D - 187 234 - -
Vian2g01336 486 Gene3D - 235 279 - -
Vian2g01336 486 Gene3D - 326 390 - -
Vian2g01336 486 MobiDBLite consensus disorder prediction 1 33 - -
Vian2g01336 486 SMART morn 249 270 IPR003409 -
Vian2g01336 486 SMART morn 203 224 IPR003409 -
Vian2g01336 486 SMART morn 295 316 IPR003409 -
Vian2g01336 486 SMART morn 226 247 IPR003409 -
Vian2g01336 486 SMART morn 272 293 IPR003409 -
Vian2g01336 486 SMART morn 318 339 IPR003409 -
Vian2g01336 486 SMART morn 341 362 IPR003409 -
Vian2g01336 486 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 234 279 - -
Vian2g01336 486 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 189 233 - -
Vian2g01336 486 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 250 373 - -
Vian2g01336 486 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 280 325 - -
Vian2g01336 486 Pfam MORN repeat 228 250 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 205 223 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 320 341 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 297 319 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 343 364 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 274 296 IPR003409 -
Vian2g01336 486 Pfam MORN repeat 251 273 IPR003409 -
Vian2g01336 486 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 31 439 - -
Vian2g01336 486 MobiDBLite consensus disorder prediction 12 26 - -
Vian2g01336 486 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01336 Vian-Chr2 27563798 27570035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01336 197 376 Acyl Lipid Metabolism Gene Families AT1G60890 37.778 3.64e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01336 - - gmx:102667330 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01336 2 27563798 27570035 Vian2g01336 2 27563798 27570035 ECH
Vian9g01439 9 30296270 30300933 Vian2g01336 2 27563798 27570035 PCT