Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01229 ATGGAGTTTGAAGACCGCTTCAGACACCAGGCTCAGAGACCAAAATATGATTGTCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTCAAATCTGGTCTTGCAGAAGCATGTCTCAAAAATATTAAAGACTACATGGTTGAAAAGCTTGGCATACACCCAAGCAAAATTGATGACTTATCCAACCTCCTTTACAAGAATTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCATAGTTTTGTTCATGGGAGATTACCTTATGAGAACCTAAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTGCCCTATAGGAAACTTATCTTCACAAATGCAGACAAAGTCCATGCTGCTAAGGCACTTAACAGGCTTGGATTAGAAGGCTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATTCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAGTTTGTGGGTTCAAGGACAACCAATCCAACCACTAGCAGTAATGCTCCAGCCAATTCTCAAATCTTTGACATCATAGAACATTTTGCCAAGCCCAATCCCACTTCAGTCTTGCCAAAGACACCAATTATCTGCAAACCATCAGAAAATGCCATTGAATTGGCCCTCAACATAGCCAACCTCAAACCTCAAAGAACATTGTTCTTTGAGGACAGTACCCGTAACATACAAGCTGGAAAACGTGTGGGGCTTCACACTGTGCTGGTTGGTACATCACAAAGATGCAAAGGAGCAGATTATGCTTTGGAAAGCATTCACAACCTTAAGGAAGCTGTGCCAGAACTATGGGAAACTGATATAAAATCAGAAGTTGCATACCCTGGAAAACTAGCTGTGGAAACATCTGTCACAGCTTGA 912 0.4134 MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGLAEACLKNIKDYMVEKLGIHPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEGCFEGIICFETLNPIHKSTVSDDEDDIEFVGSRTTNPTTSSNAPANSQIFDIIEHFAKPNPTSVLPKTPIICKPSENAIELALNIANLKPQRTLFFEDSTRNIQAGKRVGLHTVLVGTSQRCKGADYALESIHNLKEAVPELWETDIKSEVAYPGKLAVETSVTA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01229 303 NCBIfam pyrimidine 5'-nucleotidase 17 254 IPR010237 -
Vian9g01229 303 SFLD C1.5.3: 5'-Nucleotidase Like 10 283 IPR010237 -
Vian9g01229 303 Gene3D - 82 281 IPR023214 -
Vian9g01229 303 NCBIfam HAD-IA family hydrolase 209 254 IPR006439 -
Vian9g01229 303 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 283 - -
Vian9g01229 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 6 302 - -
Vian9g01229 303 SUPERFAMILY HAD-like 15 281 IPR036412 -
Vian9g01229 303 Pfam Haloacid dehalogenase-like hydrolase 211 254 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01229 Vian-Chr9 25892620 25894533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01229 K07025 - gmx:100787007 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01242 2 25675002 25676879 Vian9g01229 9 25892620 25894533 PCT