Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01242 ATGGACTGGATCAACACTATGATTGTCTTCCTTTATGCTGCTTTTGCTTATATCGGTGCTAATCCGAGTTTTCTGCCTGAAATGGAGTACGAGGACCGCTTCAGACAGAACCAGAGACCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACCTTGTATCCACTAAGCACTGGTATTGCAAAAGCGTGTGGCCAAAATATTAAAGATTATATGGTGGAAAAGCTTGGCATAGAGAAAAGCAAAATCGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGAAGATTGCATTATGAGAACTTGAAACCAGACCCAGTTCTGAGGAACCTTTTGCTGAGCCTGCCCTATAGGAAACTAATCTTCACAAACTCAGACAAAGTCCATGCAGTTAAAGCACTCAGCAGGCTTGGATTAGAGGACTGCTTTGAAGGAATCATTTGCTTTGAGACGCTTAATCGCATCCATAAAAACACTGTCTCCGATGATGAAGATGACATTGAGTTTGTGGGGGGTTCAAACACAACCAATCCAACCAGAAAAAAAGAGGCTAGAACCTCACAAACCTTTGACATCATTACCCACTTTTCTCAATCCAATCCCAACACAGTTTTGCCTAAGACACCAATTATTTGCAAACCATCAGAACATGCCATTGAATTGGCTCTCAAGATAGCCAACCTTAACCCGCAAAGAACTTTGTTCTTTGAGGACAGTGTCCGTAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAGAGCATCCACAACCTTAGAGAGGCTGTGCCAGAACTATGGGAAGATGACATAAAATCAGAAGTTGCTTACCCTGGAAACCTTGCTGTGGAGACATCTGTGACTGCTTAG 990 0.4152 MDWINTMIVFLYAAFAYIGANPSFLPEMEYEDRFRQNQRPKYDCLLFDLDDTLYPLSTGIAKACGQNIKDYMVEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLHYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHAVKALSRLGLEDCFEGIICFETLNRIHKNTVSDDEDDIEFVGGSNTTNPTRKKEARTSQTFDIITHFSQSNPNTVLPKTPIICKPSEHAIELALKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPELWEDDIKSEVAYPGNLAVETSVTA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01242 329 Gene3D - 108 307 IPR023214 -
Vian2g01242 329 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 31 328 - -
Vian2g01242 329 SUPERFAMILY HAD-like 41 308 IPR036412 -
Vian2g01242 329 NCBIfam HAD-IA family hydrolase 234 280 IPR006439 -
Vian2g01242 329 Pfam Haloacid dehalogenase-like hydrolase 45 178 IPR041492 -
Vian2g01242 329 Pfam Haloacid dehalogenase-like hydrolase 200 280 IPR041492 -
Vian2g01242 329 NCBIfam pyrimidine 5'-nucleotidase 43 178 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01242 Vian-Chr2 25675002 25676879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01242 K07025 - gmx:100795391 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01242 2 25675002 25676879 Vian2g01242 2 25675002 25676879 ECH
Vian2g01242 2 25675002 25676879 Vian9g01229 9 25892620 25894533 PCT