Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01060 ATGGGGGACTTCAACCTGGCGCTGGTGATCGTGGCGATCGTGGTGTGCGTTATCGTATTCCTCGTCAACGTATACCTCCTCGTCAATTACCAGCACCCCGATGACATTAACCAGGCCTACTTCCCCAAATTTGTCGTCGTTTTGGGTCTCTCCGTCGCCGCCATCTCCATACTCATGCTTCCCGCCGACGTTGCTAACCGTCAGGCCTGTCGGCACGCCATCTACAATGGCGCGTGCAATCTCACGCTCCCCATGAAGGACCTCTGGCTCGCGGTGTACATCCTCGACGCGATCCTGGTCTTCTTCGTCATCCCCTTCGCCATGTTCTACTACGAAGGCGACCAGGACAAGAGTGTTGGTAAGAGGATTAAGAGCGCGTTGTGTTGGATGGTGACCACTGCGATTGTGTGCGCTCTTATTTTGGGGATTTTGTATGGACTTATTGGAAAGGTGGACTTTACTGTTAGGCATCTCTCTTCTTCCACAAACTCATTTCCTAGCACATGGGAGTTCAGCAGTAGTCAACAATGTATTGGAAACACACATCAGTGTTCTGCATACACTGCCAGTCCTTCATCAGAGAAAACCTGGACCATGCGTACTACCTTTCCGGAATATGTTGTTGCTCTGGCCACTATAGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCTTTCATTCGGCGTCCAAAGGCTGTTATCACTCGTTCACAGTATATCAAGGAAGCTACTGAATTGGGCAAAAAAGCAAAAGATCTGAAGAAAGCAGCTGAGTCACTTCATCAGGAAGAAAAAGGTGGTTCAAAGGGTAGGAAATTTCGTAAAAATGTGAAATCAGTAGAAAAGGAGTTACTTCAATTAGAAGAAGACGTCAAGCTTCTTGAAGAGATGTACCCACAAGGAGAAAAGGCTGAGGCAACATGGGCACTAACAGTTCTAGGGTATCTGGCAAAACTTGTTTTGGGAATTTTAGGGTTAATCGTTTCTGTGGCGTGGGTTGGTCATATCATTATCTATCTATTAGTTGATCCTCCTCTTTCTCCTTTCTTGAATGAAGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTTGGTACAGCTGCATTTGCATTCTTCTGCTTCTACCTTCTTCTTGCTGTGATTGCTGGAGCCATGGTGCTTGGGCTGAGACTAGTTTTCATTACTATTCATCCAATGAAGTGGGGAGCTACTCTCATGAACTCTTTTCTGTTCAATGTGGGCCTTATTCTTCTTTCTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGTCACACCTTGGAGTCTCTTCGGGGAATTAAATATTTGTACAAATACAATGTCTTCCAGATCGCGTTTGTTGCATTGGCTGGGTTAACTTTTGTATATTATGCTGCCTTTGTAAGGATGGAGAAGAAAGAAGCCCAGTGGCAGGTTCCAATTGTCTACATGAGGATTATAGAGTTGGCTGATGCGCATTCAAATAGAATCATTTTTCTGAGGTGTAATCATTGGGTGGGTGCTTGCGATACCACTTAG 1617 0.4515 MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDINQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAILVFFVIPFAMFYYEGDQDKSVGKRIKSALCWMVTTAIVCALILGILYGLIGKVDFTVRHLSSSTNSFPSTWEFSSSQQCIGNTHQCSAYTASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAESLHQEEKGGSKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAEATWALTVLGYLAKLVLGILGLIVSVAWVGHIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMVLGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFVRMEKKEAQWQVPIVYMRIIELADAHSNRIIFLRCNHWVGACDTT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01060 538 Coils Coil 255 275 - -
Vian9g01060 538 Pfam LMBR1-like membrane protein 9 277 IPR006876 -
Vian9g01060 538 Pfam LMBR1-like membrane protein 287 486 IPR006876 -
Vian9g01060 538 Coils Coil 282 309 - -
Vian9g01060 538 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01060 Vian-Chr9 21703348 21708988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01060 K14617 - gmx:100800757 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00969 2 16525829 16537531 Vian9g01060 9 21703348 21708988 PCT