Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00969 ATGGGCGATTTCAACCTCGCCCTGGTGATCGTGGCGGTGGTGGTCTGCGTGATCGTGTTCCTCGTCAACGTGTACCTCTTGGTCAACTACCAGCATCCTGACGATGCCAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTTTAGGCCTCTCTATCGCTGCCATCTCCATCCTCATGCTCCCCGCCGACGTGGCTAACCGCCATGCCTGCCGCCACGCGATCTACAACGGGGCGTGCAACCTCACCCTCCCCATGAAGGACCTCTGGCTCGCCGTTTACATCGTCGACGCTATCCTCGTCTTCTTCGTCATCCCATTCGCCATGTTCTACTACGAGGGCGACCTTGACAAGACTATGGGGAAGAGGATTAAGAGTGCGTTAATGTGGATGGTCACCACGGCTATAGTGTGCGCCCTCGTTCTGGGTATTTTATACGGGCTGGTTGGTAAGGTGGACTTTACTGTTAGGCACCTCTCTTCATCGACAACTGCATTTCCTAGCACATGGACATTCAATAGTAATGAACAATGTATTGGAAATGGTGTCCATCAGTGCTCAGCTTACTCTGCCAGTCCTTCGTCAGAGAAAACATGGACCATGCGTAGTACCTTCCCAGAATATGTTGTTGCACTCGCTACTATTGTTGGATCCGTGCTTTTTGCTATATTTGGCGGTGTTGGTATTGCATGTCTTCCATTAGGACTTATATTTTCATTTATTCGGCGTCCAAAGGCTGTTATCACTCGCTCACAGTATATCAAGGAAGCCACTGAACTAGGTAAAAAAGCAAAAGATTTAAAGAAAGCAGCCGAGGCTCTCCGTCAGGAAGAAAAGGGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTGAAGGCAGTCGAGAAGGAGGTTTTTCAATTAGAAGAAGACGTAAAGCTTCTTGAAGAGATGTATCCTCAAGGGGAAAAGGCTGAGACAACATGGGCACTAACGATTCTTGGTTATCTGGCAAAACTTGTTTTTGGAATTTTAGGGTTGATTGTTTCCGTTGTGTGGATCATTCATATTATTATCTATCTATTAATTGATCCACCACTTTCTCCTTTCCTGAATCAAGTTTTCATCAAGCTAGACGATGTATGGGGTCTTCTCGGCACTGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTACTGGTGCCATGGTGCTTGGACTGAGACTAGTTTTTATTACTATACATCCCATGAAGTGGGGAGCAACTCTTATGAACTCTTTTCTGTTTAATGTGGGCCTTATTCTTCTTTCTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCCTTTGCCTACTATGCTCAAGCAACTGCAGCCCAGGAAATCTTTGGCCACACTTTGGAGTCTCTTCGAGGAATTAAATATTTATACAAGTACAATGTGTTCCAAATTGCGTTTGTTGCTTTAGCTGGATTGACCTTTGTGTATTACGCTGCGTTTGGATGGAGAAGAAAAAAACCTAGTGGGAGGTTCCAATTATCTACATAA 1530 0.4562 MGDFNLALVIVAVVVCVIVFLVNVYLLVNYQHPDDANQAYFPKFVVVLGLSIAAISILMLPADVANRHACRHAIYNGACNLTLPMKDLWLAVYIVDAILVFFVIPFAMFYYEGDLDKTMGKRIKSALMWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTAFPSTWTFNSNEQCIGNGVHQCSAYSASPSSEKTWTMRSTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAEALRQEEKGGSKGRKFRKNVKAVEKEVFQLEEDVKLLEEMYPQGEKAETTWALTILGYLAKLVFGILGLIVSVVWIIHIIIYLLIDPPLSPFLNQVFIKLDDVWGLLGTAAFAFFCFYLLLAVITGAMVLGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLST 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00969 509 Coils Coil 256 276 - -
Vian2g00969 509 Coils Coil 290 310 - -
Vian2g00969 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Vian2g00969 509 Pfam LMBR1-like membrane protein 9 278 IPR006876 -
Vian2g00969 509 Pfam LMBR1-like membrane protein 285 487 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00969 Vian-Chr2 16525829 16537531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00969 K14617 - gmx:100816750 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00969 2 16525829 16537531 Vian2g00969 2 16525829 16537531 ECH
Vian2g00969 2 16525829 16537531 Vian9g01060 9 21703348 21708988 PCT