Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00968 ATGGCTACCCAATTCCTCATTCTCACCCTTCTCATCTTCTGCAGCACCCTCACTTTCACCACAGCCCAAGTCACAAACACAGGTTTCGTAGGTTCACCAGACCCCAAGGCATTAGGTTTAAAGGAAAAACTCAGTTTTAGCCATTTCCGCTTCTACTTCCACGAGAGGTTCGCCGGAAGCAACCCCACCTCCGTCTTTGTGGTTCCGCCTGTACCCAAGTACAACTCCAGCACCTTATTCGGCACGGTGGGGTTCATGGACACCGCCTTGACAGTGGGACCGGAGCCAACCTCCAAGGTGGTGGGAAGAATCGAGGGTTTGGTTGCAGGAACGTCGCAGAGGGAGTTTATCTTGTTGGTGGTTCTGAACTTCGTGTTAACCGAAGGGAAGTACAATGGGAGCACCATCACTGTGTTGGGGAGGAACCGCATCACCCAAAACATCAGGGAGATTCCGGTAATTGGAGGCACTGGAGTGTTCAGATTTGCCACGGGATATGCAGAGACTAATACCATTTTTCTTGATCCAAAAACGAGGTCTACCATTGAATACAACATTTATGTTTCCCACTACTTTTGA 579 0.4957 MATQFLILTLLIFCSTLTFTTAQVTNTGFVGSPDPKALGLKEKLSFSHFRFYFHERFAGSNPTSVFVVPPVPKYNSSTLFGTVGFMDTALTVGPEPTSKVVGRIEGLVAGTSQREFILLVVLNFVLTEGKYNGSTITVLGRNRITQNIREIPVIGGTGVFRFATGYAETNTIFLDPKTRSTIEYNIYVSHYF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00968 192 PANTHER NUCLEOPORIN-RELATED 35 187 IPR004265 -
Vian9g00968 192 Gene3D - 37 189 IPR044859 -
Vian9g00968 192 Pfam Dirigent-like protein 47 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00968 Vian-Chr9 18808639 18809217 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00968 - - vra:106755110 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00968 9 18808639 18809217 Vian2g00890 2 14330213 14330785 PCT