Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00890 ATGTTCACCAAACTTTTCTTCTTCTTTCTCCTCTTCACTCCCTTCATCTTCACCACACAACAAGACACCCATGATGATTTCGTGCGTACCTTGGACCGCAAAATGTTTGGTTTGGACGAAAACCAAGAAAAGTTTAGTCATTTCAGGTTGTATTGGCACGACGTGGTGAGTGGACGCAACCCTTCTTCCATCGAAGTAGTTTCATCAGGGTTGAAGAACTCAACGACGTCGTTTGGAGCGGTGAACATGATAGAGAACCCTTTGACATTGGAACCCCAATTGAACTCTCAGTTGGTGGGGAAGGCACAGGGGTTCTATGCTTCGACGTCGCAGAGTGATGTTACCTTGCTGATGGCCATGAACTTCGCCATCACTGAAGGGAAGTACAATGGCAGCAGCTTCACCATTCTTGGAAGGAACCCTGTTTTCAACGAGAAGAGGGAGATGCCTGTGATCGGTGGAAGTGGCCTCTTTCGTTTTGCTAGGGGTTATGCTCAGCTCAGAACTCACTGGTTCTCGCCCACCACCAGGGATGCCATTGTTGAGTATACTGTTTATCTTCTGCATTATTGA 573 0.4729 MFTKLFFFFLLFTPFIFTTQQDTHDDFVRTLDRKMFGLDENQEKFSHFRLYWHDVVSGRNPSSIEVVSSGLKNSTTSFGAVNMIENPLTLEPQLNSQLVGKAQGFYASTSQSDVTLLMAMNFAITEGKYNGSSFTILGRNPVFNEKREMPVIGGSGLFRFARGYAQLRTHWFSPTTRDAIVEYTVYLLHY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00890 190 PANTHER NUCLEOPORIN-RELATED 34 186 IPR004265 -
Vian2g00890 190 Pfam Dirigent-like protein 46 187 IPR004265 -
Vian2g00890 190 Gene3D - 35 187 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00890 Vian-Chr2 14330213 14330785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00890 - - gmx:100796078 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00890 2 14330213 14330785 Vian9g00969 9 18913398 18913961 PCT
Vian9g00968 9 18808639 18809217 Vian2g00890 2 14330213 14330785 PCT