Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00905 ATGGAAGTTTCCGACACGCCGGCGAACCGGTCCGAATCGGGTTTCAGGGCGGAGATCGATACATCGGCGCCGTTCGAATCCGTGAGGGAAGCCGTCTCGCGGTTCGGCGGCGTTGGGTATTGGAAACCCATTATCAATGGTCTTGGCAATAAGCATTTCGAGCCTGAGCTGCATCACCCAGAAGAGCTTGACCCTGGAAAACTGGAGGAGCAAGCTGCTGTATTGGAGAAAGAGCTGATCCTGAAAGAAAGGGAAACTCTAGATGTCTTGAAAGAGTTGGAAAGTACCAAAAGGCTTGTGGAGAATTTGAAATCAAAGTTGCAGAAAGAAGAATCTGAAGCGAAATTGAATTTCCAAACGAGTGTGTGCAATTATATGTGTACTGTTAAAAAGGATGAGAAAGAAGATAAGGAAAACCAAGTGAGTAATGTTGTTCAGGATTTGAATGAAGGTTGTGTCCCCTGTCATTCATCAGCCCCAGGTTTAATATTAAAGGAATTGGAGCAAGCAAAACTGAATCTGAACAGAACCACAAGTGATATTGCTGATGTTCGCGCTTCTGTTGAATCACTCAATAAGAAGTTAGAGAAGGAAAGATTATCTCTTGAGAAGACACGGGAGAGGTTAACTCAGAATTCTTCAAAGATATGCTGTCTTGAGGAAGAGCTAAACCAGACAAAACTAAAACTGCTCGTGGCAAAAGATACTGGTTTGGATAACCCTTCGGATATTCCAAAAGAGCTCCATCGGCTGAGTTCTGAGGCAGAGAATTTCAAGAGAATGGGAGAAGCTGCTAAATCAGAAGTCTCGAAAGCAATGTCTGAGATTGAACAGACAAAAGCTATGATAAAAACTGCTGAAATCAGGCTGGTTGCTGCTCGAAAAATAAAGGAAGCTGCTAGAGCAGCAGAAGCAGCTGCCCTTGCAGAGATAAAAGCTTTATCACATAATGATAATTCACCTGGAGAGTGCGTGCAGAAGCATGATGGAATTACCCTTTCCTTTGAAGAGTATAATGCACTGACCTGCAAGGCGCGGGAGGCCGAGGAACATTCTAAGAAGAGAGTTGTAGATGCTATGCTTCTAGTAGATGAAGCAAATGTATCAAAAATGGACATTTTGAAGAAGGTAGAGGAAGCCACAGAAGAAGTTAAAACCAGCAAGAAGGCCCTCGAGGAAGCTCTAGAAAGGGTAGAGGCTGCAAATCTAGGAAAGTTAGCAGTTGAAGAGGCGTTAAGGAAGTGGCGGTCGGACAGTCACAGACGGCGATCCTCCATACATAACTCCACCAAGTTTAAAAATGCTTACCCTTCTCACTATAGAAAGGAATCTCGGTTACTCGACGTGAACGGGTTGAATCTGGTAAATGATGAGGCCAAGCCAGTTCTTAAGCCAACACTGTCTATAGGAGAAATATTGAGTAGAAAGTTGATGATGCCAGAAGAGTATGAAGCTGGAGAGAGAGAGTCAGTTAAAGGGAAGGTTTCTCTTGGTCAGATGCTAGGCAGACAAAATGCAGATGCATCATCCTTTGACAGGCAAGCTGAGAAGGAAAATGGTCAGAAGCAGTTTTCTGCAAAGAGAAAGAAATTTGGATTTGGTAGATTCTCTCTTCTTTTGACAAAGCAGCAAAAGAAGAAGAAGCCAACCCTGAACTTGAGTTTGTCCATCAATTGTGATGCCACTTGTAGAGATGATTTATGTCAATTTGACTCTTGGATCATGGAAGGAAGAATGGGGCTTTTGTTTCTGTTTTTGTTGGGTGCTGCTTGGGTTTGTGATGCAAGAGAGCTAGCAAACGGTGGTGAAGTAAACAGGAAATCAGATGTCTGTGAACTTTGTGAGGAATATACCACTGAGGCACTTGCTTATCTAAATGATAAAGAGAACCAAAGAGAGATTATTGATTCGCTTCACAATAAATGTTATCAGATTCTCTCTTTCAAACAGCAGTGCATTGAATTGGTGGATTATTATGCCCCACGTTTCTTCTCAGAAATCGCATCAGTTCTGCCTAGAGAACTCTGCAGACAGGTCCACCTCTGCCAATCTGCAAATATCTCCTCACAAGTTCAAGGAAATAAGTGTGACTCTTGCAAAGATACTGTTTCAGCCATACTGGTTAAGTTGAATGATCCTGACACCAAGCTTGAGATAATGGAGGCACTGTTGAAGGCATGCAATTCTATGGATCAGTTGGCAAAGAAGTGCAAGAGGATGGTTTTTGAATATGGACCTCTGATTATTGTGAAAGCAGAGAAGTACCTGAAAACAACAGATATATGCACTACATTACATGTTTGTCCAGCTTCTACTGCAGTTAGCAACAAGGAAGCCTCAATCATGGAAGAAGAACCTTTGATTTCTGACTCTTAA 2376 0.4259 MEVSDTPANRSESGFRAEIDTSAPFESVREAVSRFGGVGYWKPIINGLGNKHFEPELHHPEELDPGKLEEQAAVLEKELILKERETLDVLKELESTKRLVENLKSKLQKEESEAKLNFQTSVCNYMCTVKKDEKEDKENQVSNVVQDLNEGCVPCHSSAPGLILKELEQAKLNLNRTTSDIADVRASVESLNKKLEKERLSLEKTRERLTQNSSKICCLEEELNQTKLKLLVAKDTGLDNPSDIPKELHRLSSEAENFKRMGEAAKSEVSKAMSEIEQTKAMIKTAEIRLVAARKIKEAARAAEAAALAEIKALSHNDNSPGECVQKHDGITLSFEEYNALTCKAREAEEHSKKRVVDAMLLVDEANVSKMDILKKVEEATEEVKTSKKALEEALERVEAANLGKLAVEEALRKWRSDSHRRRSSIHNSTKFKNAYPSHYRKESRLLDVNGLNLVNDEAKPVLKPTLSIGEILSRKLMMPEEYEAGERESVKGKVSLGQMLGRQNADASSFDRQAEKENGQKQFSAKRKKFGFGRFSLLLTKQQKKKKPTLNLSLSINCDATCRDDLCQFDSWIMEGRMGLLFLFLLGAAWVCDARELANGGEVNRKSDVCELCEEYTTEALAYLNDKENQREIIDSLHNKCYQILSFKQQCIELVDYYAPRFFSEIASVLPRELCRQVHLCQSANISSQVQGNKCDSCKDTVSAILVKLNDPDTKLEIMEALLKACNSMDQLAKKCKRMVFEYGPLIIVKAEKYLKTTDICTTLHVCPASTAVSNKEASIMEEEPLISDS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00905 791 Coils Coil 90 113 - -
Vian9g00905 791 Gene3D - 691 771 - -
Vian9g00905 791 Pfam Weak chloroplast movement under blue light 17 115 IPR008545 -
Vian9g00905 791 Pfam Weak chloroplast movement under blue light 117 422 IPR008545 -
Vian9g00905 791 SUPERFAMILY Saposin 694 770 IPR011001 -
Vian9g00905 791 Pfam Saposin-like type B, region 2 735 768 IPR008138 -
Vian9g00905 791 Pfam Saposin-like type B, region 2 650 682 IPR008138 -
Vian9g00905 791 Coils Coil 167 212 - -
Vian9g00905 791 Gene3D - 606 683 - -
Vian9g00905 791 Coils Coil 363 401 - -
Vian9g00905 791 Gene3D - 162 318 - -
Vian9g00905 791 SMART sapb_4 694 768 IPR008139 -
Vian9g00905 791 SMART sapb_4 609 682 IPR008139 -
Vian9g00905 791 MobiDBLite consensus disorder prediction 510 524 - -
Vian9g00905 791 Coils Coil 269 289 - -
Vian9g00905 791 ProSiteProfiles Saposin B type domain profile. 607 686 IPR008139 -
Vian9g00905 791 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 17 115 - -
Vian9g00905 791 MobiDBLite consensus disorder prediction 505 524 - -
Vian9g00905 791 ProSiteProfiles Saposin B type domain profile. 692 772 IPR008139 -
Vian9g00905 791 Pfam Saposin-like type B, region 1 695 730 IPR007856 GO:0006629
Vian9g00905 791 SUPERFAMILY Saposin 608 684 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00905 Vian-Chr9 16311235 16319674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00905 - - gmx:100783770 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00837 2 12554482 12557410 Vian9g00905 9 16311235 16319674 PCT