Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00837 ATGGAAATGGGAGGTGCTGACGTAGCCGAAACGACGACGAATCAAGGCGAACGGAGTTCGGAGAAGAAGAGTTTGAGAACGGAGGTTGATACTTCAGCACCCTTTGAATCGGTGAAAGATGCGGTCACAATGTTTGGGGGTATTGGTTACTGGAAACCCCTTCACAGTAAGATCAGTACGTGTGTGCCTTCTCATTCAGAGCAGCACTCAGCAGAGCTCAGCACTGAAACACTGGAGGAGCAGGCTTCAGGATTGGAGAAAGAACTGATCTTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAGTACCAAAAAGCTTGTTGAAGAATTGAAATCAAAGATACAGAAGGAACAGTCTGAAGTGAACTTGAATCTTCAGCTTGGCGAATGTGATAGAAAATCAGTTGTTGAAGAGAATGAAGAAAAGGAAAACCAGATGAGTCAATTGAATGTTCTTCAACCTTCCAGACAAGGTTTTGCTTCCCATCTTCCATCTGTGCCGGGTTTAATATTACAGGAATTGAAGCAGGCCAAGTTGAATTTAACCAGAACTACTGTTGATCTCGCTGATGTCCGAACTTCTGTAGAATCGCTCAATAAGAAGTTAGAGAAGGAAAGAATCTCACTTGAGAAAACACGTGAGAGGTTAGCTCAAAATACTTCAAAAATATCTTCTCTTGAGGAAGAGCTAAACCATACCAGATTAAGGCTGCAAATAGCAAAAGGGGCTGAAATTAAAGATGCTTCAGATGATCCTTCGGTTATTACTAGAGAGCTCCAGCGATTGAGTTCTGAGGCCGAGAATTTCAAAATAATGGGAGAATCTGCAAAAGCAGAAGTTCTGAGAACCATGTCCGAGATTGAACAGACAAAAACCATGATAAGAACTGCTGAAATCAGATTGGTTGCAGCCAGAAAAATGAAAGAAGCTGCTAGAGCTGCAGAAGCTTTTGCCCTTGTAGAAATTAACGCATTATCTAATCATGAAAATGAGAGTTTACCTGGAAATCAGATTACTCTTTCATTTGAAGAGTATACCGCTCTGACATGCAAAGCCCATGATGCAGAGGAACAATCTAGGAAGAGAGTTGCAAATGCAATGCTTGAAGTTGATGAAACAAATTTGTCAAACATGGACATTTTGAAAAGGGTAGAAGAAGCTACAGAGGAAGTTAAAACCAGCAAGAAGGCCCTAGAAGAAGCTCTGGAAAGGGTAGAAGCTGCAAATAGAGACAAGGTAGAGGTTGAAGAGGCTTTAAGGAATTGGCGCTCGGAGGGTCACAAAAGACGCTCTATACAAAACCCCACCAAGTTCAAAACCTCTTGTTCCTCTCATCATTGGAGAGATCCTCGGTTACTAGATGTTAATGGATTAAATCTGGTAAATGATGAAGCAAAGCCCGTTCTAAAGTCAACCCTATCAATAGGACAAATACTTAGCAGAAAGCTGCTTCAACCACAAGAGTGTGAAGCTGGAGAAAGAATCTCAATGAAACAGAATGTGTCTCTGGGTCAGATGCTTGGTAAACAAAACATTGATCCACCAATTGACAGACAAATTGAGAAAGGAACTAGCCGTAAGCTGTTTTCTACCAAGAGAAATAAATTTGGATTTGCACGTTTCTCTCATATTTTGTCAAAACAGCAGAAGAATAAGAAGAAGCCAACCCTGAATTTGAGGTGA 1692 0.4102 MEMGGADVAETTTNQGERSSEKKSLRTEVDTSAPFESVKDAVTMFGGIGYWKPLHSKISTCVPSHSEQHSAELSTETLEEQASGLEKELILKERETLDVLKELESTKKLVEELKSKIQKEQSEVNLNLQLGECDRKSVVEENEEKENQMSQLNVLQPSRQGFASHLPSVPGLILQELKQAKLNLTRTTVDLADVRTSVESLNKKLEKERISLEKTRERLAQNTSKISSLEEELNHTRLRLQIAKGAEIKDASDDPSVITRELQRLSSEAENFKIMGESAKAEVLRTMSEIEQTKTMIRTAEIRLVAARKMKEAARAAEAFALVEINALSNHENESLPGNQITLSFEEYTALTCKAHDAEEQSRKRVANAMLEVDETNLSNMDILKRVEEATEEVKTSKKALEEALERVEAANRDKVEVEEALRNWRSEGHKRRSIQNPTKFKTSCSSHHWRDPRLLDVNGLNLVNDEAKPVLKSTLSIGQILSRKLLQPQECEAGERISMKQNVSLGQMLGKQNIDPPIDRQIEKGTSRKLFSTKRNKFGFARFSHILSKQQKNKKKPTLNLR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00837 563 Coils Coil 75 95 - -
Vian2g00837 563 Coils Coil 100 123 - -
Vian2g00837 563 MobiDBLite consensus disorder prediction 1 31 - -
Vian2g00837 563 Coils Coil 135 155 - -
Vian2g00837 563 Coils Coil 384 428 - -
Vian2g00837 563 Pfam Weak chloroplast movement under blue light 169 432 IPR008545 -
Vian2g00837 563 Pfam Weak chloroplast movement under blue light 27 125 IPR008545 -
Vian2g00837 563 Coils Coil 195 246 - -
Vian2g00837 563 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 28 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00837 Vian-Chr2 12554482 12557410 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00837 - - vum:124842552 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00837 2 12554482 12557410 Vian2g00837 2 12554482 12557410 ECH
Vian2g00837 2 12554482 12557410 Vian9g00905 9 16311235 16319674 PCT