Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00823 ATGGCTTCTTCGGAAGCCTATTCCCGTCTGAGGCTGGTCGTGGTACCCGCGCTTGAGAAGATAATCAAGAACGCGTCGTGGCGGAAGCATGCCAAACTCACTCATGAGTGCAAATCCGTCATTGAGAGGCTCGGCCTCCAGCACCAGCATTTTCCAACGCCGGGATCTCCCTCCGACAATGAACCGGACGTTCCTGGTCCGCTCCATGACGGAGGTCCGTTGGAGTTCTCCTTGGCAGAGTCCGAGTCAATCCTCATGCCTCTCATCAATGCTGCCGGCTCCGGAGTCCTCAAAATCGCCGATCCCGCCGTGGACGCCATCCAGAAGCTCATTGCGCATGGCTTCATCCGCGGCGAGGCGGAGCCGGCCTCCGGTGCTGCGGCGCCGGAGGCGAAGCTCCTGTCCAAGCTCATTGAATCGGTCTGCAAATGTCACGATTTCGGCGACGATGCGATGGAGTTACTGGTCCTCAAGACCTTGCTCTCCGCCGTGACGTCAATTTCGCTCCGCATCCACGGTGATTCCTTGCTTCTCATTGTGCGAACCTGCTACGATATATATCTCGTGAGCAACAATGTGGTGAATCAGACGACCGCGAAGGCGTCGTTGATCCAAATGCTGGTGATCGTGTTCCGTCGCATGGAGGCGGATTCCTCGACTGTGCCGATTCAACCGATCGTAGTGGCGGAATTGATGGAGCCTGCAGAGAAATCCGATGAAGACAATTCAATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGGCGCCAAGTGGGAAGGTTAATTTGCTAGGTGGGCACGACGGTGCGTTCGAGACCACCACGGTGGAGACTACGAACCCTACTGACTTGTTGGATTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTAGAGGTTCAGATTGGGAATAAGTTGAGGAGAGATGCTTTTTTGGTGTTTAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCGAAGGAGGCGGTAGGAGACCCGCAGTTGATGAAGGGGAAGATCGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGGGCTGTGTTCAGGACTAGTGACAGGTTTTTAGGTGCCATCAAACAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTAATTGTATTTCAGCTGTCATGCTCCATTTTTATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTATTTTTCCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAGCCTAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTGGAAAAGCTCTGCGTTGATTCACAGATATTGGTTGACATATTTATTAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTCCTTAAAACTGCTCAAGGTGTGCCCCCTGGTGTAACAACCACACTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAAGCCATGAAAGGCTTGATTGCAGTTCTAAAATCAATGGGGGACTGGATGAACAAACAATTGCGCATTCCTGATTCTCATTCAGCCAAGAAAGTTGAAGCATTGGATGACAGCCCAGAAACTGGAGGTCTTACCATGGTAAATGGGAATGGAGAAGACCCTCCAGATGGATCTGACACTCAATCAGAAATCTCCAATGATGCTTCTGGTGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTCAATAGGAGGCCTGAGAAAGGAATTGAATTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAAAGGATATAGCTACTTTTCTTAAAGAAGCATCTGGGTTGAACAAGACTATGATTGGTGATTATCTGGGAGAAAGAGAAGAGTTAGCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGATATGGAGTTTGACGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTACTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACTGCTTATGTCCTTGCCTATTCTGTTATAATGCTTAATACTGATGCTCACAATCCCATGGTGAAGAATAAGATGTCTCCTGATGATTTCATAAGAAATAATCGTGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAAGTCCTTGTTTGACAGAATATCTAGAAATGAAATCAAAATGAAAGAAAATGATGAGGCTCCTCAACAAAAACAGGTTGTGAGCCCTAATCGACTATTAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACGTGGTGAAGAGAATTTGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTAGCAGATCTGAATCAATTTATTATGCTGCCACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGCTGGGCACCTATGTTAGCCGCCTTTAGTGTTCCTCTTGATCAAAGTGACGATGAAGTTTTAATATCTCTATGTCTTGAAGGCTTCCGCCATGCTATTCATGTTACTTCTGTAATGTCGATGAAGACTCACAGAGATGTTTTTGTGACGTCGTTAGCAAAGTTTACCTCACTACATTCACCAGCTGACATTAAGCAGAAAAATATATATGCAATTAAGGCAATAGTTGTTATTGCTGATGAAGATGGAAATTACTTACAAGAAGCTTGGGAACATATGTTGACTTGTGTTTCTCGGTTTGAGCATTTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCATTTCCTCAGAATGATTCAGAAAAAACAAAGCAAGCGAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACTTGGGAGGATGCAGTATGCAGCTGCTTCATTGATGCGGGGTTCATATGATAGTGCTGGAATTGGTAGTAATGGTTCTGGAGTCACTTCAGAACAGGTGAACAATCTAGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGCCGTATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGAGGAACTGAGATCTCCATCTGATCCACGTGTTTTTAGCCTTACAAAGATTGTTGAGATTGCGCACTACAATATGAACCGCATAAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCGGATTTCTTTGTAACTATTGGCTGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTACGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGCTGGCTAATTATAATTTTCAAAATGAGTTTATGAAGCCTTTTGTCATTGTTATGAGAAAGAGTAGTGCGGTTGAAATTAGAGAGTTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGCGATTACTTCCCTTACATCACTGAGACTGAAACTACAACCTTCACAGACTGTGTAAATTGTCTAATTGCGTTTACCAGTAGTAAATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTCCGGTTTTGTGCAACAAAACTAGCGGCGGGGGACCTTGGCTCATCATCAAGGAGTAAGGATAAGGAACTTTCTGGAAAGGTTTCCCCTTCTTCACTTCAAACAGCAAAGGAGGGGAAAAATGATAATGGAGAGGCTGCTGACAAGGATGATCATCTCTATTTTTGGTTTCCTTTATTGGCAGGTTTGTCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGAAGTCCTGTTTGAAACCTTACGTAACTATGGCCATCTCTTTTCGCTAACTTTATGGGAAAGAGTATTTGAGTCTGTCTTATTTCCAATTTTCGATTATGTTCGACATGGTATTGATCCTTCAGGAAGTAGTTCACCAGTCAATGAAGAAGAGGCGGATCATGGTGAGCTTGATCAAGATGTCTGGCTTTACGAGACATGCACATTAGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTCTACGACACTGTCAATCCACTTTTGAGAAAGGTGCTGATGCTCCTGGTTAACTTTATAAATCGTCCTCATCAAAGCCTTGCAGGCATTGGTATTGCGGCTTTTGTTCGCTTGATGACTCATGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGCAGCAGCAAAGGCAACACTTCCTAACTTCTTGTTTCTGGAAATCGAGGACTTAACTGGAAGTGACGAGGATGCTTCAATCGCTGATGATAGAGATTTTGCTGAATCTGGCTTCCCAGATAATTTAACACACTTGAGAAATCGTGCTGTTTATGCTCATTTAACTGATGCAAAGTGTCGAGCTGCTGTTCAGCTTTTACTGATTCAGGCGGTGACGGAGATCTATAACATGTATCGTTCTCACCTTTCAGCAAAAGCCATGATAGTCCTATTTGATGCGTTGCACGAAATAGCGTTACACGCGCATCAGATTAACAACAATGCCATATTACGTTCAAAGCTCCTAGAGTTTGGCTCTATGAGTCAAATGCAAGACCCTCCACTCTTACGGCTTGAGAATGAATCGTATCAGATCTGCCTTACATTTTTACAAAACCTTGTCCTTGACAAGCCTACTAGTTATGAAGCGCATGAGGTCGAATCTCATCTCATTCAGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGGACTAAAATCTGAATCTTCTCATGGTCGAGTGCCACATTGGTATGTTCCCTTGGGCTCCGGGAAGAGTAGAGAATTGGCTTCTCGTTCACCTCTCGTTGTGGCTACTCTGCACGCTATTTGTAGTTTGGGAGATGTTTCCTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTTATTTCTAGCTTGATAAGCTGTGAGCATGGGTCCAAGGACGTCCAGGTTGCTCTCAGTGACATGCTTACTTTATCAGTTGGTCCTATTTTGCTACAGTCATGTTGA 5349 0.4358 MASSEAYSRLRLVVVPALEKIIKNASWRKHAKLTHECKSVIERLGLQHQHFPTPGSPSDNEPDVPGPLHDGGPLEFSLAESESILMPLINAAGSGVLKIADPAVDAIQKLIAHGFIRGEAEPASGAAAPEAKLLSKLIESVCKCHDFGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSNNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPAEKSDEDNSMTQFVQGFITKIMQDIDGVLNPTAPSGKVNLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEAVGDPQLMKGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKGLIAVLKSMGDWMNKQLRIPDSHSAKKVEALDDSPETGGLTMVNGNGEDPPDGSDTQSEISNDASGVSNIEQRRAYKLELQEGISLFNRRPEKGIEFLINANKVGDSPKDIATFLKEASGLNKTMIGDYLGEREELALKVMHAYVDSFNFQDMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSPDDFIRNNRGIDDGKDLPEEYLKSLFDRISRNEIKMKENDEAPQQKQVVSPNRLLGLDSILNIVIRKRGEENLETSDDLIRHMQEQFKEKASRSESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVLISLCLEGFRHAIHVTSVMSMKTHRDVFVTSLAKFTSLHSPADIKQKNIYAIKAIVVIADEDGNYLQEAWEHMLTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGLGRMQYAAASLMRGSYDSAGIGSNGSGVTSEQVNNLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTSSKFNKEISLNAIAFLRFCATKLAAGDLGSSSRSKDKELSGKVSPSSLQTAKEGKNDNGEAADKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNYGHLFSLTLWERVFESVLFPIFDYVRHGIDPSGSSSPVNEEEADHGELDQDVWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVNFINRPHQSLAGIGIAAFVRLMTHAGELFSDEKWLEVVFSLKAAAKATLPNFLFLEIEDLTGSDEDASIADDRDFAESGFPDNLTHLRNRAVYAHLTDAKCRAAVQLLLIQAVTEIYNMYRSHLSAKAMIVLFDALHEIALHAHQINNNAILRSKLLEFGSMSQMQDPPLLRLENESYQICLTFLQNLVLDKPTSYEAHEVESHLIQLCQEVLEFYIEVAGFGLKSESSHGRVPHWYVPLGSGKSRELASRSPLVVATLHAICSLGDVSFEKNLSHFFPLISSLISCEHGSKDVQVALSDMLTLSVGPILLQSC 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00823 1782 SMART sec7_5 614 799 IPR000904 GO:0005085|GO:0032012
Vian9g00823 1782 Pfam BIG2 C-terminal domain 1573 1770 IPR046455 -
Vian9g00823 1782 ProSiteProfiles SEC7 domain profile. 610 797 IPR000904 GO:0005085|GO:0032012
Vian9g00823 1782 CDD Sec7 617 799 IPR000904 GO:0005085|GO:0032012
Vian9g00823 1782 Pfam C-terminal region of Mon2 protein 1347 1407 IPR032817 -
Vian9g00823 1782 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 692 810 - -
Vian9g00823 1782 MobiDBLite consensus disorder prediction 591 607 - -
Vian9g00823 1782 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 346 504 IPR032691 -
Vian9g00823 1782 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 599 690 - -
Vian9g00823 1782 Pfam Domain of unknown function (DUF1981) 1166 1248 IPR015403 -
Vian9g00823 1782 SUPERFAMILY ARM repeat 381 1513 IPR016024 -
Vian9g00823 1782 Gene3D - 603 691 - -
Vian9g00823 1782 MobiDBLite consensus disorder prediction 48 72 - -
Vian9g00823 1782 Gene3D - 692 813 IPR023394 -
Vian9g00823 1782 SUPERFAMILY Sec7 domain 614 806 IPR035999 GO:0005085|GO:0032012
Vian9g00823 1782 MobiDBLite consensus disorder prediction 1304 1337 - -
Vian9g00823 1782 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 77 1647 - -
Vian9g00823 1782 MobiDBLite consensus disorder prediction 564 607 - -
Vian9g00823 1782 Pfam Sec7 domain 618 799 IPR000904 GO:0005085|GO:0032012
Vian9g00823 1782 Pfam Dimerisation and cyclophilin-binding domain of Mon2 8 217 IPR032629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00823 Vian-Chr9 12230747 12241356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00823 K18442 - gmx:100798955 3162.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00739 2 10498867 10517742 Vian9g00823 9 12230747 12241356 PCT