Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00739 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAAGCAGGTGCTCGTTCCCGCGCTCGAGAAAATCATCAAGAACGCGTCGTGGAGAAAACACGCGAAGCTCGCACACGAGTGCAAATCCGTGATCGAAAACCTAACCTCACAGCCGAAGCCTCAGTCGCCGGCCTCCGACGACGCCGCCGATCTGGAGGCATCCGTACCCGGCCCGATCCACGATGGAGGTCCAGTGGAGTACTCGCTCGCAGAGTCGGAGTCGATCCTACGCCCGCTCATCGCAGCCGCGGGCTCCGGCGTCGTGAAGATCGCCGATCCCGCTGTCGACGCCGTACAGCGACTCATCGCGCACGGATTCCTTCGCGGTGAGGCCGACTCCGGTGGCGGCGCGCCCGAGGCCAAGCTGCTCGCGAGCCTGATTGAGGCAGTGTGCAAGTGCCACGAATTCGGCGACGACGCCGTCGAATTGCTCGTGCTGAAGACTCTCTTGTCAGCGGTGACTTCGATTTCGCTGCGAATTCACGGCGATTGCTTGCTGTTGATTGTGAGAACTTGTTATGACATATTCCTAGATAGTAAGAATTTGGTGAATCAGACGACGGCGAAAGCGTCGTTGATTCAGATGTTAGTGATTGTGTTTAGGAGGATGGAGGCGGATTCGTCCACGGTTCCTGTTCAGCCTATTGTTGTGGCTGAATTGATGGATCCTGTAGAGAAATCTGACGCGGAAAACTCCATGACGCAGTCTGTACAGGGTTTTATCACCAAGATTGTGCAGGACATCGATGGAGTTCTGAATCCGGTGGCGCCGTCATCTTTGGGCGCACATGACGGTGCCTTTGAGACAACAGTGGCGGCAACCGTGGAGGCTGCGAATCCAGCGGATTTGTTGGATTCCACTGACAAAGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTATAAGACGGCATTGGAAGGGAGGAAAGAGGAACTGGTGGATGGCGAGGTGGTGGAGAGGGACGATGATCTGGAGATTCAGATTGGGAATAAGCTCAGGAGAGATGCATTTTTGGTGTTCAGGGCCCTTTGTAAGTTGTCCATGAAGACGCCGACGAAGGAGGCATCTGTGGACCCTCAGTTGATGAAGGGGAAGATTGTGGCCCTGGAGTTGTTGAAGATCTTGTTGGAGAATGCCGGAGCTGTCTTCAGGACTAGCGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGTTTATCATTGCTGAAGAACAGTGCCTCAACTCTTTTGATCGTTTTTCAGCTATCTTGCTCCATCTTCATTAGTCTGGTATCAAGATTTAGAGCTGGACTGAAAGCAGAAATTGGAGTATTTTTCCCCATGATTGTTCTTAGGGTTCTAGAAAATGTTGCTCAACCTAATTTCCAGCAAAAGATGATTGTGCTTCGTTTTCTGGAGAAGCTCTGTGATGATTCACAGATATTGGTAGACATTTTTATCAATTATGACTGTGATGTCAATTCAACAAACATATTTGAGAGGATGGTAAATGGACTCCTTAAAACTGCCCAGGGTGTCCCTCCTGGTGCAACAACCACAGTTTTGCCACCTCAAGAGGAAACACTGAAACTTGAAGCCATGAAGTGTTTAGTTGCTGTTTTAAAATCCATGGGAGACTGGATGAACAAACAATTCCGCATTCCAGATCCTCTTTCAGGCAAAAAAGTTGAAGCAGTTGATAATGATCATGATGCTGGAGTTCCTCCCACTGCAAATGGGAATGGTGAAGAGCCAGCTGAAGGATCAGATACTCAGTCTGAAGTCTCCAATGAGACATCTGAGGAAGGTATATCACTTTTTAACAGGAAGCCAAAGAAAGGAATTGAATTCCTCATCAATGCCAACAAAGTGGGTAATTCACCAGAGGAAATAGCAGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGGGATTATCTAGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCATATGTGGATTCTTTTGACTTTCAAGGGTTGGAGTTTGATGAAGCAATCAGGGCCTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAGAAAATTGATCGAATTATGGAAAAGTTTGCAGAACGATATTGTAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACGGCGTATGTTCTTGCCTATTCTGTGATACTGCTTAACACTGATGCTCATAATCCTATGGTGAAAAACAAGATGTCGGCTGAAGATTTCATAAAAAATAATCGTGGCATAGATGATGGAAAAGATGTACCAGAAGAATATTTGAGGTCTTTGTATGAACGAATATCTAGAAATGAGATCAAAATGAAAGAAGTTGATCTGGAAACCCAGCAAATTCAGGCTGTGAACTCGAACAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGGAAGCGAGGGGAAGACAGTAATATGGAGACCAGTGATGATCTAATCCGACATATGCAGGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAATCTATTATGCAGCAACTGATGTTGTAATCCTCAGATTCATGATTGAGGTCTGCTGGGCACCAATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAATTTATAATAGCGCTGTGTCTTGAGGGCTTTCGATATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCACAGAGATGCTTTTGTGACTTCACTAGCAAAATTTACCTCCCTTCATTCTCCTGCTGATATTAAGCAGAAAAATATAGATGCGATCAAGGTGATTGTTACTATTGCTGATGAGGATGGGAATTACTTGCAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGATTTGAACATCTACATCTTCTCGGAGAGGGGGCCCCACCTGATGCCACTTTCTTTGCATTCCCTCAAAATGATTCTGAAAAAACAAAGCAATCAAAATCAACTATTCTTCCTGTTTTAAAGAAAAAGGGACCCGGAAGGATGCAATATGCAGCTGCCACAGTGATGCGGGGTTCATATGATAGCACTGGAATCGGTAGTAATACTTCTGGAGCTGTGACTTCGGAACAGGTGAACAATCTAGTCTCCAATTTGAACATGTTGGAACAAGTCGGAAGCTCGGAAATGAATCGCATATACACTCGGAGTCAGAAGCTGAACAGTGAGGCCATAATAGATTTTGTCAAGGCTTTGTGCAAAGTTTCCATGGAGGAACTTAGATCTCCATCTGATCCACGGGTGTTCAGCCTTACAAAGATAGTTGAAATTGCACACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATATGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGCTGTTCTGGGAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGAGAGGAATTGGCTAATTATAATTTTCAGAATGAATTTATGAAGCCTTTCGTCATTGTTATGAGGAAGAGTAGTGCTGTTGAAATTAGAGAACTTATCATTAGATGTGTCTCCCAAATGGTTTTATCACGGGTCAACAATGTAAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAATATTGTACTCTTGTCTTTTGAAATTATGGAGAAAATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACCACCTTTACAGATTGTGTTAATTCAGGAGACCTTGGATCTTCGTCCAGAAATAGTGACAAGGAAACTTATGGAAAGGTGTCTACTCCTTCACCTCGAACAGGAAAAGAGGGGAAACAAGAAAATGGGGAGGTGACAGACAAAGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCTGAACTTAGCTTTGACCCAAGATCTGAAATAAGGCAAAGCGCCTTGAAGGTCCTGTTTGAAACGTTACGCAACCATGGCCACCTTTTTTCACTACCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCCATTGATCCTTCTGGGAGTAACTCAGAGGTCAATGAATCAGAGACTGACGGTCAGCTTGATCAAGATGCATGGCTTTACGAGACATGCACACTAGCCCTGCAATTGGTTGTAGATCTTTTTGTCAACTTCTATAACACTGTCAATCCACTTTTAAGGAAGGTTTTGATGCTCCTGGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTGGCTGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAGAAGTGGTTAGAAGTGGTTTTTTCACTAAAAGAAGCAGCAAATGCAACACTCCCTAACTTTCAATTCCTTGACAGTGGAGACATTGCGACTGGAAATCATGAACATGCTTCAATGGCTGAAGATGACAGGGATCCTGAGCAGTCTGGCTCACATGATAGTTTACAAAGCGTGAGGACTCAACATCTTTATGCACATTTATCTGATGCAAAGTGCCGAGCTGCTGTTCAGCTTTTATTGATCCAGGCGGTGATGGAGATCTATAACATGTATCGATCTCAGCTTTCAGCAAAAGCTCTACTTGTCTTGTTTGAGGCTTTGCATGATGTGGCATTACATGCTCACAAGATTAACAGCAATCTCATTTTACGTTCAAAATTACAAGAGTATGGCTCTATGACTCAAATGCAAGACCCTCCACTGTTACGCCTGGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTTGTTGTGGATACGCCTCCTAATTATGAGGAGATTGAGGTAGAGACACTTTTTGTTCAGCTTTGTCAGGAAGTCTTGAAGTTTTATATTGAAGTTGCAGGTTCTGGAAGAGTATCCGAATCTTCTAATGGTAGGCAGCTGAATTGGTTAGTTCCACTAGGGTCTGGGAAGAGGAGAGAATTGGCTGCACGTGCACCCCTTGTTGTGGCCTCTCTTCAAGGTATGTGTAATTTGGGAGATACATCTTTGGAGAAGAACCTGGATCATTTTTTCCCTCTTATCACTGGCTTGATAAGTTGCGAACATGGGTCAACTGAGGTTCAGGTAGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTCTTCTGCTACGCTCATGTTAA 5217 0.4391 MASSEADSRLKQVLVPALEKIIKNASWRKHAKLAHECKSVIENLTSQPKPQSPASDDAADLEASVPGPIHDGGPVEYSLAESESILRPLIAAAGSGVVKIADPAVDAVQRLIAHGFLRGEADSGGGAPEAKLLASLIEAVCKCHEFGDDAVELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIFLDSKNLVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMDPVEKSDAENSMTQSVQGFITKIVQDIDGVLNPVAPSSLGAHDGAFETTVAATVEAANPADLLDSTDKDMLDAKYWEISMYKTALEGRKEELVDGEVVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPTKEASVDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILVDIFINYDCDVNSTNIFERMVNGLLKTAQGVPPGATTTVLPPQEETLKLEAMKCLVAVLKSMGDWMNKQFRIPDPLSGKKVEAVDNDHDAGVPPTANGNGEEPAEGSDTQSEVSNETSEEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGLEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSAEDFIKNNRGIDDGKDVPEEYLRSLYERISRNEIKMKEVDLETQQIQAVNSNRLLGLDSILNIVIRKRGEDSNMETSDDLIRHMQEQFKEKARKTESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEFIIALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQSKSTILPVLKKKGPGRMQYAAATVMRGSYDSTGIGSNTSGAVTSEQVNNLVSNLNMLEQVGSSEMNRIYTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLSFEIMEKIIRDYFPYITETETTTFTDCVNSGDLGSSSRNSDKETYGKVSTPSPRTGKEGKQENGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALKVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSNSEVNESETDGQLDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAANATLPNFQFLDSGDIATGNHEHASMAEDDRDPEQSGSHDSLQSVRTQHLYAHLSDAKCRAAVQLLLIQAVMEIYNMYRSQLSAKALLVLFEALHDVALHAHKINSNLILRSKLQEYGSMTQMQDPPLLRLENESYQICLTFLQNLVVDTPPNYEEIEVETLFVQLCQEVLKFYIEVAGSGRVSESSNGRQLNWLVPLGSGKRRELAARAPLVVASLQGMCNLGDTSLEKNLDHFFPLITGLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 1738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00739 1738 MobiDBLite consensus disorder prediction 565 609 - -
Vian2g00739 1738 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 216 IPR032629 -
Vian2g00739 1738 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 69 1603 - -
Vian2g00739 1738 MobiDBLite consensus disorder prediction 1489 1503 - -
Vian2g00739 1738 MobiDBLite consensus disorder prediction 1489 1508 - -
Vian2g00739 1738 MobiDBLite consensus disorder prediction 1259 1292 - -
Vian2g00739 1738 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 591 673 - -
Vian2g00739 1738 SUPERFAMILY ARM repeat 401 1362 IPR016024 -
Vian2g00739 1738 ProSiteProfiles SEC7 domain profile. 605 780 IPR000904 GO:0005085|GO:0032012
Vian2g00739 1738 MobiDBLite consensus disorder prediction 43 72 - -
Vian2g00739 1738 Pfam C-terminal region of Mon2 protein 1302 1374 IPR032817 -
Vian2g00739 1738 Pfam Sec7 domain 602 782 IPR000904 GO:0005085|GO:0032012
Vian2g00739 1738 SUPERFAMILY Sec7 domain 604 790 IPR035999 GO:0005085|GO:0032012
Vian2g00739 1738 Pfam Domain of unknown function (DUF1981) 1151 1233 IPR015403 -
Vian2g00739 1738 Pfam BIG2 C-terminal domain 1529 1727 IPR046455 -
Vian2g00739 1738 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 675 793 - -
Vian2g00739 1738 Gene3D - 675 795 IPR023394 -
Vian2g00739 1738 SMART sec7_5 597 782 IPR000904 GO:0005085|GO:0032012
Vian2g00739 1738 Gene3D - 602 674 - -
Vian2g00739 1738 MobiDBLite consensus disorder prediction 588 608 - -
Vian2g00739 1738 MobiDBLite consensus disorder prediction 1259 1284 - -
Vian2g00739 1738 CDD Sec7 600 782 IPR000904 GO:0005085|GO:0032012
Vian2g00739 1738 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 344 502 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00739 Vian-Chr2 10498867 10517742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00739 K18442 - gmx:100789988 3145.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00739 2 10498867 10517742 Vian2g00739 2 10498867 10517742 ECH
Vian2g00739 2 10498867 10517742 Vian9g00823 9 12230747 12241356 PCT