Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00792 ATGGCTGTAAGTGCTGAGGGAGAGACTATGGCTGTGGATGCTGCACCAAGGAGGCCCCGAATTCTGCTTGCTGCTAGTGGGAGTGTTGCTGCTGTCAAATTTGCAAATCTGTGTCATTGTTTCTCTGAATGGGCAGATGTAAGAGCAGTTGCCACAAATGCATCTTTGCATTTCATTGATAGAGCTTCAATGCCAAAGGATGTAACTTTATACACTGATGACAATGAATGGTCTAGTTGGATGAAACTTGGTGATAATGTGCTTCACATTGAGCTCCGCAAATGGGCTGATATCATGGTCATTGCTCCATTATCAGCAAACACCCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACATGCATTGTGCGAGCCTGGGACTACAGCAAGCCATTTTTTGTTGCACCAGCCATGAACACTCTTATGTGGAACAATCCTTTCACCGAGCGGCATCTCATCGCCATTGATGAGCTTGGAATTTCTCTCATCCCACCTGTTACAAAGAGGTTAGCTTGTGGAGATTATGGCAATGGTGCCATGGCTGAACCCTCTACCATTTACTCAACTGTAAGGCTCTTCTATGAGTCAAAGGCTCAGCAAGGTAATGGTGATATCTGA 624 0.4551 MAVSAEGETMAVDAAPRRPRILLAASGSVAAVKFANLCHCFSEWADVRAVATNASLHFIDRASMPKDVTLYTDDNEWSSWMKLGDNVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTLMWNNPFTERHLIAIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNGDI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00792 207 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 14 200 - -
Vian9g00792 207 Gene3D - 18 206 IPR036551 GO:0003824
Vian9g00792 207 Pfam Flavoprotein 20 193 IPR003382 GO:0003824
Vian9g00792 207 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 18 195 IPR036551 GO:0003824
Vian9g00792 207 FunFam Phosphopantothenoylcysteine decarboxylase 13 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00792 Vian-Chr9 11081771 11083186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00792 K01598 - gmx:100499989 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00720 2 9902450 9903263 Vian9g00792 9 11081771 11083186 PCT
Vian9g00792 9 11081771 11083186 Vian2g00722 2 9967779 9968661 PCT